RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ZNF276Q8N554 614 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 FATE1Q969F0 183 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 ZNF689Q96CS4 500 aaPredicted RBP10.87□□□□□ -0.67
CLCN6-208ENST00000494028 MYEOVQ96EZ4 313 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 HMCESQ96FZ2 354 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 CABS1Q96KC9 395 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 PAIP2Q9BPZ3 127 aaKnown RBP10.87□□□□□ -0.67
CLCN6-208ENST00000494028 MCOLN1Q9GZU1 580 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 C12orf65Q9H3J6 166 aaKnown RBP10.87□□□□□ -0.67
CLCN6-208ENST00000494028 PCMTD2Q9NV79 361 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 AFF4Q9UHB7 1163 aaKnown RBP10.87□□□□□ -0.67
CLCN6-208ENST00000494028 SOX13Q9UN79 622 aa10.87□□□□□ -0.67
CLCN6-208ENST00000494028 USP15Q9Y4E8 981 aaPredicted RBP10.87□□□□□ -0.67
CLCN6-208ENST00000494028 ZCWPW2A0A1B0GU75 182 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 PSMD3O43242 534 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 EDF1O60869 148 aaKnown RBP10.86□□□□□ -0.67
CLCN6-208ENST00000494028 KRT38O76015 456 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 USP1O94782 785 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 SEC24AO95486 1093 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 SOD2P04179 222 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 HMBSP08397 361 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 CCNB1P14635 433 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 CNTFP26441 200 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 OR1D2P34982 312 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 NDST2P52849 883 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 GEMP55040 296 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 SF3A3Q12874 501 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLCN6-208ENST00000494028 IKBKEQ14164 716 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 SMAD1Q15797 465 aaKnown RBP10.86□□□□□ -0.67
CLCN6-208ENST00000494028 ANO4Q32M45 955 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 CERCAMQ5T4B2 595 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 FBXL22Q6P050 247 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 CES3Q6UWW8 571 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 TIFABQ6ZNK6 161 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 CDHR3Q6ZTQ4 885 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 OTOP3Q7RTS5 596 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 TMEM135Q86UB9 458 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLCN6-208ENST00000494028 PDZD8Q8NEN9 1154 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 SPATA22Q8NHS9 363 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 LRRC8CQ8TDW0 803 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 OVCA2Q8WZ82 227 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 CCT6BQ92526 530 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 CDKL2Q92772 493 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 IGSF8Q969P0 613 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 ZNF558Q96NG5 402 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 FCRL3Q96P31 734 aaPredicted RBP10.86□□□□□ -0.67
CLCN6-208ENST00000494028 TBL1YQ9BQ87 522 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 FICDQ9BVA6 458 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 UBE2OQ9C0C9 1292 aaKnown RBP10.86□□□□□ -0.67
CLCN6-208ENST00000494028 ABCF3Q9NUQ8 709 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 UBP1Q9NZI7 540 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 IL1RAPL1Q9NZN1 696 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 BFARQ9NZS9 450 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 PRKAG3Q9UGI9 489 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 IPO11Q9UI26 975 aaKnown RBP10.86□□□□□ -0.67
CLCN6-208ENST00000494028 HBS1LQ9Y450 684 aaKnown RBP10.86□□□□□ -0.67
CLCN6-208ENST00000494028 PSAT1Q9Y617 370 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 RPS6KL1Q9Y6S9 549 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 ANKRD36A6QL64 1941 aa10.86□□□□□ -0.67
CLCN6-208ENST00000494028 DNAH12Q6ZR08 3092 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 FAM237BA0A1B0GVD1 139 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 DRGXA6NNA5 263 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 COPEO14579 308 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 ANXA9O76027 345 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 POLBP06746 335 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 HMGA1P17096 107 aaKnown RBP10.85□□□□□ -0.67
CLCN6-208ENST00000494028 LAG3P18627 525 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 TACR2P21452 398 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 ADRA1AP35348 466 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 GP5P40197 560 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 MAGEA12P43365 314 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 WDR5P61964 334 aaKnown RBP10.85□□□□□ -0.67
CLCN6-208ENST00000494028 DSG1Q02413 1049 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 TNK2Q07912 1038 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 CDH17Q12864 832 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 PLD1Q13393 1074 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 LRRC26Q2I0M4 334 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 ANKRD20A4Q4UJ75 823 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 COL13A1Q5TAT6 717 aaPredicted RBP10.85□□□□□ -0.67
CLCN6-208ENST00000494028 DENND5AQ6IQ26 1287 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 KDELC1Q6UW63 502 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 TMCO2Q7Z6W1 182 aaPredicted RBP10.85□□□□□ -0.67
CLCN6-208ENST00000494028 LRRC49Q8IUZ0 686 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 CMTR2Q8IYT2 770 aaKnown RBP10.85□□□□□ -0.67
CLCN6-208ENST00000494028 DNAAF3Q8N9W5 541 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 ANKLE1Q8NAG6 615 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 IPMKQ8NFU5 416 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 PTPRN2Q92932 1015 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 ISL2Q96A47 359 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 PRICKLE1Q96MT3 831 aaPredicted RBP10.85□□□□□ -0.67
CLCN6-208ENST00000494028 PPP1R2P1Q96PQ5 205 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 FAM111AQ96PZ2 611 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 SRPK1Q96SB4 655 aaKnown RBP10.85□□□□□ -0.67
CLCN6-208ENST00000494028 CDK5RAP1Q96SZ6 601 aaKnown RBP10.85□□□□□ -0.67
CLCN6-208ENST00000494028 CLSTN3Q9BQT9 956 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 IL22Q9GZX6 179 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 SLCO1B3Q9NPD5 702 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 TMEM39AQ9NV64 488 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 MAGED2Q9UNF1 606 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms