RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 DTLQ9NZJ0 730 aa15.25■□□□□ 0.03
ACTB-213ENST00000493945 UBA2Q9UBT2 640 aaPredicted RBP15.25■□□□□ 0.03
ACTB-213ENST00000493945 IPO11Q9UI26 975 aaKnown RBP15.25■□□□□ 0.03
ACTB-213ENST00000493945 FARP1Q9Y4F1 1045 aaPredicted RBP15.25■□□□□ 0.03
ACTB-213ENST00000493945 SHROOM3Q8TF72 1996 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 CCDC188H7C350 402 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 STK25O00506 426 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 KRIT1O00522 736 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 ZBTB24O43167 697 aaPredicted RBP15.24■□□□□ 0.03
ACTB-213ENST00000493945 DLDP09622 509 aaKnown RBP15.24■□□□□ 0.03
ACTB-213ENST00000493945 CISD3P0C7P0 127 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 CCNCP24863 283 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 MAGEA9P43362 315 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 RECQLP46063 649 aaPredicted RBP15.24■□□□□ 0.03
ACTB-213ENST00000493945 SOX9P48436 509 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 PAPOLAP51003 745 aaKnown RBP15.24■□□□□ 0.03
ACTB-213ENST00000493945 RENBPP51606 427 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 EIF3EP60228 445 aaKnown RBP15.24■□□□□ 0.03
ACTB-213ENST00000493945 ZXDAP98168 799 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 OTUD4Q01804 1114 aaKnown RBP15.24■□□□□ 0.03
ACTB-213ENST00000493945 GBE1Q04446 702 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 PPIDQ08752 370 aaKnown RBP15.24■□□□□ 0.03
ACTB-213ENST00000493945 AP1B1Q10567 949 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 KLF1Q13351 362 aaPredicted RBP15.24■□□□□ 0.03
ACTB-213ENST00000493945 ZNF235Q14590 738 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 PON2Q15165 354 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 FUT11Q495W5 492 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 FSCBQ5H9T9 825 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 TMEM196Q5HYL7 178 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 AFMIDQ63HM1 303 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 KIAA0907Q7Z7F0 614 aaPredicted RBP15.24■□□□□ 0.03
ACTB-213ENST00000493945 CCDC13Q8IYE1 715 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 SIX5Q8N196 739 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 NPWQ8N729 165 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 ACTL9Q8TC94 416 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 FATE1Q969F0 183 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 TTC17Q96AE7 1141 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 LRRC45Q96CN5 670 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 CAPZA3Q96KX2 299 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 PPP1R2P1Q96PQ5 205 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 VAT1Q99536 393 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 IER2Q9BTL4 223 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 ACE2Q9BYF1 805 aaPredicted RBP15.24■□□□□ 0.03
ACTB-213ENST00000493945 SLC39A8Q9C0K1 460 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 ETNK2Q9NVF9 386 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 ELOVL2Q9NXB9 296 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 AMACRQ9UHK6 382 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 F5P12259 2224 aa15.24■□□□□ 0.03
ACTB-213ENST00000493945 A0A0D9SEW6 157 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 KANSL1LA0AUZ9 987 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 PRAMEF11O60813 436 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 ATG13O75143 517 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 RBP3P10745 1247 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 MZF1P28698 734 aaPredicted RBP15.23■□□□□ 0.03
ACTB-213ENST00000493945 VASPP50552 380 aaPredicted RBP15.23■□□□□ 0.03
ACTB-213ENST00000493945 GALK1P51570 392 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 STARD6P59095 220 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 MRPS21P82921 87 aaKnown RBP15.23■□□□□ 0.03
ACTB-213ENST00000493945 UBXN2BQ14CS0 331 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 LLGL1Q15334 1064 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 CCNG2Q16589 344 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 GAB4Q2WGN9 574 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 FNDC3BQ53EP0 1204 aaKnown RBP15.23■□□□□ 0.03
ACTB-213ENST00000493945 INO80DQ53TQ3 878 aaPredicted RBP15.23■□□□□ 0.03
ACTB-213ENST00000493945 SLC45A4Q5BKX6 768 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 DARS2Q6PI48 645 aaKnown RBP15.23■□□□□ 0.03
ACTB-213ENST00000493945 OR7D4Q8NG98 312 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 WFDC5Q8TCV5 224 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 OLFM3Q96PB7 478 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 TSGA13Q96PP4 275 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 QKIQ96PU8 341 aaKnown RBP eCLIP15.23■□□□□ 0.03
ACTB-213ENST00000493945 CINPQ9BW66 212 aaPredicted RBP15.23■□□□□ 0.03
ACTB-213ENST00000493945 OSBPL6Q9BZF3 934 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 CEP44Q9C0F1 390 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 NDFIP2Q9NV92 336 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 SEPT3Q9UH03 358 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 VPS51Q9UID3 782 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 CDC23Q9UJX2 597 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 NCOR1O75376 2440 aa15.23■□□□□ 0.03
ACTB-213ENST00000493945 A0A0A0MRY4 1105 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 GAS8O95995 478 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 MAPK8P45983 427 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 SLC6A11P48066 632 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 SERPINH1P50454 418 aaKnown RBP15.22■□□□□ 0.03
ACTB-213ENST00000493945 RAD51Q06609 339 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 BYSLQ13895 437 aaKnown RBP15.22■□□□□ 0.03
ACTB-213ENST00000493945 STARD3Q14849 445 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 GEN1Q17RS7 908 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 MARC1Q5VT66 337 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 AADACL2Q6P093 401 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 DRICH1Q6PGQ1 229 aaPredicted RBP15.22■□□□□ 0.03
ACTB-213ENST00000493945 SERPINA13PQ6UXR4 307 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 ZC3H18Q86VM9 953 aaKnown RBP15.22■□□□□ 0.03
ACTB-213ENST00000493945 ARHGAP12Q8IWW6 846 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 ZNF513Q8N8E2 541 aaPredicted RBP15.22■□□□□ 0.03
ACTB-213ENST00000493945 ATP11CQ8NB49 1132 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 COG1Q8WTW3 980 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 EDAQ92838 391 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 CHFRQ96EP1 664 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 FBRSQ9HAH7 460 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms