RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ACSM2AQ08AH3 577 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 ACSM2BQ68CK6 577 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 KIAA0408Q6ZU52 694 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 BHLHE22Q8NFJ8 381 aaPredicted RBP20.43■□□□□ 0.86
RNF40-203ENST00000493683 ARMCX1Q9P291 453 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 MTF2Q9Y483 593 aaPredicted RBP20.43■□□□□ 0.86
RNF40-203ENST00000493683 BIRC5O15392 142 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 SNAP91O60641 907 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 MT-CO1P00395 513 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 SLC12A3P55017 1021 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 XIAPP98170 497 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 FGD3Q5JSP0 725 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 BROXQ5VW32 411 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 PMF1Q6P1K2 205 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 KLHL17Q6TDP4 642 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 REPS2Q8NFH8 660 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 OMA1Q96E52 524 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 NUDT17P0C025 328 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 PAX3P23760 479 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 CLCN5P51795 746 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 KLHL12Q53G59 568 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 TRMT11Q7Z4G4 463 aaKnown RBP20.42■□□□□ 0.86
RNF40-203ENST00000493683 KRT77Q7Z794 578 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 SYT12Q8IV01 421 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 Q96MT0 163 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 CYLDQ9NQC7 956 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 STON1Q9Y6Q2 735 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 CKBP12277 381 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 RPL3P39023 403 aaKnown RBP20.42■□□□□ 0.86
RNF40-203ENST00000493683 NR1H2P55055 460 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 WDR60Q8WVS4 1066 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 ADARB2Q9NS39 739 aaKnown RBP20.42■□□□□ 0.86
RNF40-203ENST00000493683 CATSPERZQ9NTU4 200 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 DDX18Q9NVP1 670 aaKnown RBP20.42■□□□□ 0.86
RNF40-203ENST00000493683 MRPL39Q9NYK5 338 aaKnown RBP20.42■□□□□ 0.86
RNF40-203ENST00000493683 SNCAIPQ9Y6H5 919 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 SPATA31A5Q5VU36 1347 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 SPATA31A7Q8IWB4 1347 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 MLYCDO95822 493 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 INSRRP14616 1297 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 CYP2R1Q6VVX0 501 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 DSG4Q86SJ6 1040 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 AMER2Q8N7J2 671 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 BBS4Q96RK4 519 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 SASH3O75995 380 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 ERBB2P04626 1255 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 ATP5F1P24539 256 aaPredicted RBP20.42■□□□□ 0.86
RNF40-203ENST00000493683 MMP13P45452 471 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 NEPROQ6NW34 567 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 PPP1R14AQ96A00 147 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 NUAK2Q9H093 628 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 POLLQ9UGP5 575 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 LEF1Q9UJU2 399 aaPredicted RBP20.42■□□□□ 0.86
RNF40-203ENST00000493683 E9PCH4 1651 aa20.42■□□□□ 0.86
RNF40-203ENST00000493683 TRIM43BA6NCK2 446 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 NFICP08651 508 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 RPA3P35244 121 aaPredicted RBP20.41■□□□□ 0.86
RNF40-203ENST00000493683 FOXR2Q6PJQ5 311 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 MRPL9Q9BYD2 267 aaKnown RBP20.41■□□□□ 0.86
RNF40-203ENST00000493683 LRRC19Q9H756 370 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 GAKO14976 1311 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 CLUHO75153 1309 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 TPP1O14773 563 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 NOS2P35228 1153 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 ITGB3BPQ13352 177 aaPredicted RBP20.41■□□□□ 0.86
RNF40-203ENST00000493683 WDR59Q6PJI9 974 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.41■□□□□ 0.86
RNF40-203ENST00000493683 TYMPP19971 482 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 RBL1P28749 1068 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 PDK4Q16654 411 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 INTS5Q6P9B9 1019 aaKnown RBP20.41■□□□□ 0.86
RNF40-203ENST00000493683 IL27RAQ6UWB1 636 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 RP9Q8TA86 221 aaKnown RBP20.41■□□□□ 0.86
RNF40-203ENST00000493683 ATL1Q8WXF7 558 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 CHST7Q9NS84 486 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 ABCC13Q9NSE7 274 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 BLOC1S4Q9NUP1 217 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 PRKAG3Q9UGI9 489 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 C3orf18Q9UK00 162 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 ADSSP30520 456 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 BCL2L1Q07817 233 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 SLC15A2Q16348 729 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 TSEN2Q8NCE0 465 aaKnown RBP20.41■□□□□ 0.86
RNF40-203ENST00000493683 EDEM1Q92611 657 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 KAZALD1Q96I82 304 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 OSMRQ99650 979 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 SNX6Q9UNH7 406 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 BTBD3Q9Y2F9 522 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 COMMD3-BMI1R4GMX3 469 aa20.41■□□□□ 0.86
RNF40-203ENST00000493683 SMIM11AP58511 58 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 INSCQ1MX18 579 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 ARMC12Q5T9G4 340 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 AAGABQ6PD74 315 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 PACS2Q86VP3 889 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 FBXW8Q8N3Y1 598 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 CERKQ8TCT0 537 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 NOL6Q9H6R4 1146 aaKnown RBP20.4■□□□□ 0.86
RNF40-203ENST00000493683 TRIM38O00635 465 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 LTFP02788 710 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 ITGAVP06756 1048 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms