RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 FAM133BQ5BKY9 247 aaKnown RBP11□□□□□ -0.65
PHACTR4-204ENST00000493669 SDHAF4Q5VUM1 108 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 STKLD1Q8NE28 680 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 PTPRN2Q92932 1015 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 LRRC37BQ96QE4 947 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 TBL1YQ9BQ87 522 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 RETREG1Q9H6L5 497 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 MRM3Q9HC36 420 aaKnown RBP11□□□□□ -0.65
PHACTR4-204ENST00000493669 ENTPD7Q9NQZ7 604 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 PIH1D1Q9NWS0 290 aaKnown RBP11□□□□□ -0.65
PHACTR4-204ENST00000493669 FNDC1Q4ZHG4 1894 aaPredicted RBP11□□□□□ -0.65
PHACTR4-204ENST00000493669 SHROOM3Q8TF72 1996 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 USP12O75317 370 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 ALDOAP04075 364 aaKnown RBP11□□□□□ -0.65
PHACTR4-204ENST00000493669 ZDHHC11BP0C7U3 371 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 MAGEA12P43365 314 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 VEGFBP49765 207 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 TNK2Q07912 1038 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 MS4A13Q5J8X5 152 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 C14orf80Q86SX3 495 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 UNC5BQ8IZJ1 945 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 FCRL3Q96P31 734 aaPredicted RBP11□□□□□ -0.65
PHACTR4-204ENST00000493669 RBBP8Q99708 897 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 SLC13A1Q9BZW2 595 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 UNC93B1Q9H1C4 597 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 C12orf65Q9H3J6 166 aaKnown RBP11□□□□□ -0.65
PHACTR4-204ENST00000493669 SLC40A1Q9NP59 571 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 TXLNGQ9NUQ3 528 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 NUP205Q92621 2012 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11□□□□□ -0.65
PHACTR4-204ENST00000493669 TBKBP1A7MCY6 615 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 TIMM44O43615 452 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 BGNP21810 368 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 PAPOLAP51003 745 aaKnown RBP11□□□□□ -0.65
PHACTR4-204ENST00000493669 LIMK2P53671 638 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 NCALDP61601 193 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 PDE1BQ01064 536 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 EFEMP1Q12805 493 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 HNRNPDQ14103 355 aaKnown RBP11□□□□□ -0.65
PHACTR4-204ENST00000493669 MGAT5BQ3V5L5 792 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 PCID2Q5JVF3 399 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 PDPK2PQ6A1A2 396 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 POTEHQ6S545 545 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 ARHGAP36Q6ZRI8 547 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 ARMC2Q8NEN0 867 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 E2F7Q96AV8 911 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 TTLL2Q9BWV7 592 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 MARCH2Q9P0N8 246 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 IPO11Q9UI26 975 aaKnown RBP11□□□□□ -0.65
PHACTR4-204ENST00000493669 NUDT5Q9UKK9 219 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 OGDHLQ9ULD0 1010 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 TPP1O14773 563 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 BPGMP07738 259 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 ERVK-10P10266 1014 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 GATMP50440 423 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 SERPINB8P50452 374 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 SLC20A2Q08357 652 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 TAF10Q12962 218 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 MPP3Q13368 585 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 RTP2Q5QGT7 225 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 CERCAMQ5T4B2 595 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 TEDDM1Q5T9Z0 273 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 ANKRD33Q7Z3H0 272 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 CCDC91Q7Z6B0 441 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 KCNMB4Q86W47 210 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 TTC9BQ8N6N2 239 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 OVCA2Q8WZ82 227 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 UBE2OQ9C0C9 1292 aaKnown RBP10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 ECT2Q9H8V3 914 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 NPHS2Q9NP85 383 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 RBM22Q9NW64 420 aaKnown RBP eCLIP10.99□□□□□ -0.654e-6■□□□□ 10.1
PHACTR4-204ENST00000493669 MTO1Q9Y2Z2 717 aaKnown RBP10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 TRIM17Q9Y577 477 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 PSAT1Q9Y617 370 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 PCNTO95613 3336 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 DRGXA6NNA5 263 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 NEBLO76041 1014 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 EFEMP2O95967 443 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 ADRA1AP35348 466 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 RENBPP51606 427 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 OLIG2Q13516 323 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 SLC8B1Q6J4K2 584 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 RNF19BQ6ZMZ0 732 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 NLRP9Q7RTR0 991 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 OTOP3Q7RTS5 596 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 PACS2Q86VP3 889 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 NUDCD3Q8IVD9 361 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 USP33Q8TEY7 942 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 SEPT5Q99719 369 aaPredicted RBP10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 MPP6Q9NZW5 540 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 HSFX1Q9UBD0 423 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 CHKBQ9Y259 395 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 HBS1LQ9Y450 684 aaKnown RBP10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 BACE2Q9Y5Z0 518 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 GREB1Q4ZG55 1949 aa10.99□□□□□ -0.65
PHACTR4-204ENST00000493669 ATP9BO43861 1147 aa10.98□□□□□ -0.65
PHACTR4-204ENST00000493669 HNRNPCL1O60812 293 aaKnown RBP10.98□□□□□ -0.65
PHACTR4-204ENST00000493669 UNC5CO95185 931 aa10.98□□□□□ -0.65
PHACTR4-204ENST00000493669 VNN2O95498 520 aa10.98□□□□□ -0.65
PHACTR4-204ENST00000493669 HLA-DQB2P05538 268 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms