RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 A0A0A6YYJ9 748 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 GOLGA8QA0A0J9YX86 632 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 GOLGA8OA6NCC3 632 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 GOLGA6L9A6NEM1 432 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 SLC15A5A6NIM6 579 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 OR6C76A6NM76 312 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 FIGNL2A6NMB9 653 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 FAM86B1E9PN63 330 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 GOLGA8NF8WBI6 632 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 SLCO1B7G3V0H7 640 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 H0Y8G0 127 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ZNF197O14709 1029 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 HCRTR2O43614 444 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 DNAJB6O75190 326 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 CRCPO75575 148 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 MYO1DO94832 1006 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 AK1P00568 194 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 TGFAP01135 160 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 IFNA14P01570 189 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 CSF2P04141 144 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 TUBBP07437 444 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 SNRPAP09012 282 aaKnown RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 UMPSP11172 480 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ATF6P18850 670 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 TCN1P20061 433 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 FGFR2P21802 821 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ADD1P35611 737 aaKnown RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ARHGAP25P42331 645 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 NPY4RP50391 375 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 SERPINB8P50452 374 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 HIRAP54198 1017 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 TUBB4BP68371 445 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ST5P78524 1137 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 SRSF2Q01130 221 aaKnown RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 FMO1Q01740 532 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 CDC20Q12834 499 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 CLN3Q13286 438 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 TUBB2AQ13885 445 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ZRSR1Q15695 479 aaKnown RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 BAK1Q16611 211 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 RTN1Q16799 776 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 KRT24Q2M2I5 525 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 PLA1AQ53H76 456 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 TTMPQ5BVD1 217 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 SFRP5Q5T4F7 317 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ATG16L1Q676U5 607 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 RCSD1Q6JBY9 416 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 KIAA1161Q6NSJ0 714 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 TIGD7Q6NT04 549 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 SCYL2Q6P3W7 929 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 BLOC1S2Q6QNY1 142 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 TPGS1Q6ZTW0 290 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 C1orf186Q6ZWK4 172 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 EFL1Q7Z2Z2 1120 aaKnown RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 LDHDQ86WU2 507 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ULK2Q8IYT8 1036 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ADGRG2Q8IZP9 1017 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 CRYBG2Q8N1P7 616 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 POMGNT2Q8NAT1 580 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ATAD1Q8NBU5 361 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 LRRN4CLQ8ND94 238 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 BHLHE23Q8NDY6 225 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 KLHDC4Q8TBB5 520 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 SETD6Q8TBK2 473 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 CPT1CQ8TCG5 803 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 OSCP1Q8WVF1 389 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 OR1E3Q8WZA6 343 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ATG4CQ96DT6 458 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 GCNAQ96QF7 691 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 TUBB2BQ9BVA1 445 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 RAB33BQ9H082 229 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ABHD16BQ9H3Z7 469 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ETNK1Q9HBU6 452 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 NEK6Q9HC98 313 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 MRPL47Q9HD33 250 aaKnown RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 IL26Q9NPH9 171 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 C12orf4Q9NQ89 552 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ZDHHC18Q9NUE0 388 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ABCB8Q9NUT2 735 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 MIS18AQ9NYP9 233 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 MRPL15Q9P015 296 aaKnown RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 RCOR3Q9P2K3 495 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 MYO1AQ9UBC5 1043 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 COPG2Q9UBF2 871 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 NXF1Q9UBU9 619 aaKnown RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 B4GALT6Q9UBX8 382 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 INTS6Q9UL03 887 aaKnown RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 PCDHA7Q9UN72 937 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 PLAGL2Q9UPG8 496 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 ERVK-11Q9UQG0 969 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 MAN2B2Q9Y2E5 1009 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 KCNK7Q9Y2U2 307 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 RWDD3Q9Y3V2 267 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 LYVE1Q9Y5Y7 322 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.31□□□□□ -1.72
BRCA1-220ENST00000492859 TRBV23OR9-2A0A075B6M9 112 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 A0A0U1RQV5 110 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 SNTNA6NMZ2 147 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 BTBD19C9JJ37 291 aa4.31□□□□□ -1.72
BRCA1-220ENST00000492859 EML1O00423 815 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms