RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 GOLGA8FQ08AF8 430 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 NEXNQ0ZGT2 675 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 TMEM115Q12893 351 aaPredicted RBP5.55□□□□□ -1.52
SND1-216ENST00000492840 PRPF4BQ13523 1007 aaKnown RBP5.55□□□□□ -1.52
SND1-216ENST00000492840 IRF3Q14653 427 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 PREPLQ4J6C6 727 aaPredicted RBP5.55□□□□□ -1.52
SND1-216ENST00000492840 MTHFD1LQ6UB35 978 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 IL27RAQ6UWB1 636 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 FAM83HQ6ZRV2 1179 aaPredicted RBP5.55□□□□□ -1.52
SND1-216ENST00000492840 MFSD6Q6ZSS7 791 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 DENND5BQ6ZUT9 1274 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 CLNKQ7Z7G1 428 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 KBTBD2Q8IY47 623 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 ELOA2Q8IYF1 753 aaPredicted RBP5.55□□□□□ -1.52
SND1-216ENST00000492840 ADGRF2Q8IZF7 708 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.55□□□□□ -1.52
SND1-216ENST00000492840 AVL9Q8NBF6 648 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 MDGA1Q8NFP4 955 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 OR56A1Q8NGH5 318 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 ADAMTS17Q8TE56 1095 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 KLHL29Q96CT2 875 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 TRMT61AQ96FX7 289 aaKnown RBP5.55□□□□□ -1.52
SND1-216ENST00000492840 ZNF764Q96H86 408 aaPredicted RBP5.55□□□□□ -1.52
SND1-216ENST00000492840 WDYHV1Q96HA8 205 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 LCORQ96JN0 433 aaPredicted RBP5.55□□□□□ -1.52
SND1-216ENST00000492840 C5orf34Q96MH7 638 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 OSBPL9Q96SU4 736 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 NPAS1Q99742 590 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 ZSWIM1Q9BR11 485 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.55□□□□□ -1.52
SND1-216ENST00000492840 HTATIP2Q9BUP3 242 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 SMARCAD1Q9H4L7 1026 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 GRPEL1Q9HAV7 217 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 HECAQ9UBI9 543 aaPredicted RBP5.55□□□□□ -1.52
SND1-216ENST00000492840 NKX1-2Q9UD57 310 aaPredicted RBP5.55□□□□□ -1.52
SND1-216ENST00000492840 ACAD8Q9UKU7 415 aa5.55□□□□□ -1.52
SND1-216ENST00000492840 FAM208AQ9UK61 1670 aaKnown RBP5.55□□□□□ -1.52
SND1-216ENST00000492840 NFAT5O94916 1531 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 ADAMTS7Q9UKP4 1686 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 CCDC187A0A096LP49 1063 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 PRAMEF33A0A0G2JMD5 474 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 A0A1W2PS29 197 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 MYO1GB0I1T2 1018 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 F5H697 171 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 MSTNO14793 375 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 FYB1O15117 783 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 BCAT2O15382 392 aaPredicted RBP5.54□□□□□ -1.52
SND1-216ENST00000492840 PRAMEF10O60809 474 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 IPO13O94829 963 aaKnown RBP5.54□□□□□ -1.52
SND1-216ENST00000492840 ZFPL1O95159 310 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 CSPG5O95196 566 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 METTL18O95568 372 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 EIF2S1P05198 315 aaKnown RBP5.54□□□□□ -1.52
SND1-216ENST00000492840 MMP10P09238 476 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 SCG2P13521 617 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 DPEP1P16444 411 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 CDH2P19022 906 aaPredicted RBP5.54□□□□□ -1.52
SND1-216ENST00000492840 CPA2P48052 419 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 MVDP53602 400 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 RAD23AP54725 363 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 NHLH2Q02577 135 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 PPARDQ03181 441 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 OCA2Q04671 838 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 CDK18Q07002 472 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 TUBB3Q13509 450 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 DYRK1AQ13627 763 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 HLXQ14774 488 aaPredicted RBP5.54□□□□□ -1.52
SND1-216ENST00000492840 ST3GAL2Q16842 350 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 CD300EQ496F6 205 aaPredicted RBP5.54□□□□□ -1.52
SND1-216ENST00000492840 ZNF362Q5T0B9 420 aaPredicted RBP5.54□□□□□ -1.52
SND1-216ENST00000492840 ZNF648Q5T619 568 aaPredicted RBP5.54□□□□□ -1.52
SND1-216ENST00000492840 TTI2Q6NXR4 508 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 KLHL35Q6PF15 583 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 CBLL1Q75N03 491 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 SLFN11Q7Z7L1 901 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 ARHGEF25Q86VW2 580 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 KCNH5Q8NCM2 988 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 GPR150Q8NGU9 434 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 ARHGEF2Q92974 986 aaKnown RBP5.54□□□□□ -1.52
SND1-216ENST00000492840 TMEM176AQ96HP8 235 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 DESI2Q9BSY9 194 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 NDST4Q9H3R1 872 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 PCMTD2Q9NV79 361 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 EHD2Q9NZN4 543 aa5.54□□□□□ -1.52
SND1-216ENST00000492840 COPG1Q9Y678 874 aaKnown RBP5.54□□□□□ -1.52
SND1-216ENST00000492840 TNRC18O15417 2968 aaPredicted RBP5.54□□□□□ -1.52
SND1-216ENST00000492840 TEX13CA0A0J9YWL9 993 aa5.53□□□□□ -1.52
SND1-216ENST00000492840 FAM237BA0A1B0GVD1 139 aa5.53□□□□□ -1.52
SND1-216ENST00000492840 FRMD3A2A2Y4 597 aa5.53□□□□□ -1.52
SND1-216ENST00000492840 C16orf96A6NNT2 1141 aa5.53□□□□□ -1.52
SND1-216ENST00000492840 A8MV72 311 aaPredicted RBP5.53□□□□□ -1.52
SND1-216ENST00000492840 A8MVJ9 347 aa5.53□□□□□ -1.52
SND1-216ENST00000492840 GCOM1H8Y6P7 765 aaPredicted RBP5.53□□□□□ -1.52
SND1-216ENST00000492840 LEFTY2O00292 366 aa5.53□□□□□ -1.52
SND1-216ENST00000492840 PER2O15055 1255 aa5.53□□□□□ -1.52
SND1-216ENST00000492840 TP73O15350 636 aa5.53□□□□□ -1.52
SND1-216ENST00000492840 TRIAP1O43715 76 aa5.53□□□□□ -1.52
SND1-216ENST00000492840 CDC14BO60729 498 aa5.53□□□□□ -1.52
SND1-216ENST00000492840 TBX10O75333 385 aa5.53□□□□□ -1.52
SND1-216ENST00000492840 ERN1O75460 977 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms