RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 RFFLQ8WZ73 363 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 SHC3Q92529 594 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 RNF34Q969K3 372 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 NXPE2Q96DL1 559 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 PGAP3Q96FM1 320 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 CNDP2Q96KP4 475 aaKnown RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 RPL10LQ96L21 214 aaKnown RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 C1orf74Q96LT6 269 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 CCDC114Q96M63 670 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 RPRD1AQ96P16 312 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 TSPYL1Q9H0U9 437 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 FAM204AQ9H8W3 233 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 DDIT4Q9NX09 232 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 APEX2Q9UBZ4 518 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 XPO7Q9UIA9 1087 aaKnown RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 CTNND2Q9UQB3 1225 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 HS3ST2Q9Y278 367 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 RAXQ9Y2V3 346 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 FARP1Q9Y4F1 1045 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 OR51B4Q9Y5P0 310 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 COL5A1P20908 1838 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 NBEAQ8NFP9 2946 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 LAMA5O15230 3695 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 GOLGA8CPA6NN73 597 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 BECN2A8MW95 431 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 CALCAP01258 141 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 JUPP14923 745 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 PDGFRAP16234 1089 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 CKMT2P17540 419 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 ACP1P24666 158 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 ACADVLP49748 655 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 E2F1Q01094 437 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 SLC6A3Q01959 620 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 STAT4Q14765 748 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 RTP5Q14D33 572 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 DLG2Q15700 870 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 EXOC3L4Q17RC7 722 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 COL28A1Q2UY09 1125 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 SOWAHCQ53LP3 525 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-212ENST00000492407 OLFML1Q6UWY5 402 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 DHRS13Q6UX07 377 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 LAYNQ6UX15 382 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 ZNF783Q6ZMS7 281 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 KANSL1Q7Z3B3 1105 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 DCP2Q8IU60 420 aaKnown RBP9.38□□□□□ -0.91
HDAC3-212ENST00000492407 SH2D3CQ8N5H7 860 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 LSM14AQ8ND56 463 aaKnown RBP9.38□□□□□ -0.91
HDAC3-212ENST00000492407 NT5C3BQ969T7 300 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 IFT43Q96FT9 208 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 CPXM1Q96SM3 734 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 C2orf49Q9BVC5 232 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-212ENST00000492407 RETREG1Q9H6L5 497 aa9.38□□□□□ -0.91
HDAC3-212ENST00000492407 DRGXA6NNA5 263 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 TK2O00142 265 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 WNT9AO14904 365 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 DAB1O75553 588 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 PRNPP04156 253 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 HOXB3P14651 431 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-212ENST00000492407 ZNF18P17022 549 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 KRT9P35527 623 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 CXCR3P49682 368 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 STK19P49842 368 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-212ENST00000492407 STX17P56962 302 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 ZNF211Q13398 564 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-212ENST00000492407 GSE1Q14687 1217 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 TAF5Q15542 800 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 AGBL4Q5VU57 503 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 FBXL19Q6PCT2 694 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 C19orf48Q6RUI8 117 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 LRRC31Q6UY01 552 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 ARCQ7LC44 396 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 GATAD2AQ86YP4 633 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 EID2Q8N6I1 236 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 MLKLQ8NB16 471 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 PIP4K2CQ8TBX8 421 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 HNRNPLLQ8WVV9 542 aaKnown RBP9.37□□□□□ -0.91
HDAC3-212ENST00000492407 KLHDC7BQ96G42 594 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 FAM210AQ96ND0 272 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 WDCPQ9H6R7 721 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 USP29Q9HBJ7 922 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 KLHL11Q9NVR0 708 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 ARHGEF38Q9NXL2 777 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 KIAA1468Q9P260 1216 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 VPS28Q9UK41 221 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 STAP1Q9ULZ2 295 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 HS3ST4Q9Y661 456 aa9.37□□□□□ -0.91
HDAC3-212ENST00000492407 M0QYT0 321 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 BIN1O00499 593 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 RRP8O43159 456 aaKnown RBP9.36□□□□□ -0.91
HDAC3-212ENST00000492407 RTN2O75298 545 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 PAGE1O75459 146 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 SLC9A1P19634 815 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 PON1P27169 355 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 CHRNA3P32297 505 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 CDH5P33151 784 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-212ENST00000492407 USP8P40818 1118 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 GABRB2P47870 512 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 PPP2CBP62714 309 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 PPP2CAP67775 309 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 PITX1P78337 314 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms