RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CYP1A1P04798 512 aaPredicted RBP8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 ATXN1LP0C7T5 689 aaKnown RBP8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 CHRNB2P17787 502 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 FLT3P36888 993 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 GRK6P43250 576 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 CCT8P50990 548 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 CLCN6P51797 869 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 METAP1P53582 386 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 JAM2P57087 298 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 TAS2R38P59533 333 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 NOMO3P69849 1222 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 NRG1Q02297 640 aaPredicted RBP8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 OVGP1Q12889 678 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 NME3Q13232 169 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 CAMK2BQ13554 666 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 DLG2Q15700 870 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 SMAD1Q15797 465 aaKnown RBP8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 AGBL4Q5VU57 503 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 FAM46CQ5VWP2 391 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 RNF219Q5W0B1 726 aaPredicted RBP8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 NEK5Q6P3R8 708 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 LAYNQ6UX15 382 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 ZNF783Q6ZMS7 281 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 NOP9Q86U38 636 aaKnown RBP8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 IQCHQ86VS3 1027 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 ERICH1Q86X53 443 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 ZNF677Q86XU0 584 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 PNPLA1Q8N8W4 532 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 MFSD2AQ8NA29 543 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 TMIEQ8NEW7 156 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 OR14C36Q8NHC7 312 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 RHBDD1Q8TEB9 315 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 SETD7Q8WTS6 366 aaKnown RBP8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 OR8D1Q8WZ84 308 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 SNX19Q92543 992 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 RNF34Q969K3 372 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 VOPP1Q96AW1 172 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 SLC6A18Q96N87 628 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 TBCBQ99426 244 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 OMDQ99983 421 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 ACE2Q9BYF1 805 aaPredicted RBP8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 TKTL2Q9H0I9 626 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 NUP62CLQ9H1M0 184 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 GANQ9H2C0 597 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 RETREG1Q9H6L5 497 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 STAP1Q9ULZ2 295 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 DAAM1Q9Y4D1 1078 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 CEP83Q9Y592 693 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 PAXBP1Q9Y5B6 917 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 ASXL3Q9C0F0 2248 aa8.6□□□□□ -1.03
SMARCB1-207ENST00000491967 WDFY3Q8IZQ1 3526 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 A0A0D9SEW6 157 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 ILVBLA1L0T0 632 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 TLR4O00206 839 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 YKT6O15498 198 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 CD160O95971 181 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 IL1BP01584 269 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 CTSLP07711 333 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 SRCP12931 536 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 MMP8P22894 467 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 CD38P28907 300 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 PSMD8P48556 350 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 GSCP56915 257 aaPredicted RBP8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 NXPH1P58417 271 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 PPP2CBP62714 309 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 PPP2CAP67775 309 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 CDR2Q01850 454 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 SLC20A2Q08357 652 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 PTP4A2Q12974 167 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 RAPGEF1Q13905 1077 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 TPD52L1Q16890 204 aaPredicted RBP8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 PIP5KL1Q5T9C9 394 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 MANEALQ5VSG8 457 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 SFMBT2Q5VUG0 894 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 NAPEPLDQ6IQ20 393 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 DSG4Q86SJ6 1040 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 PROSER1Q86XN7 944 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 SPATS2Q86XZ4 545 aaKnown RBP8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 PLPP6Q8IY26 295 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 DCAF4L2Q8NA75 395 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 TMEM145Q8NBT3 493 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 OR2A12Q8NGT7 310 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 GANCQ8TET4 914 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 ZCCHC14Q8WYQ9 949 aaKnown RBP8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 TSC1Q92574 1164 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 CENPIQ92674 756 aaPredicted RBP8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 SKA1Q96BD8 255 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 ELF4Q99607 663 aaPredicted RBP8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 C2orf49Q9BVC5 232 aaPredicted RBP8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 SIK2Q9H0K1 926 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 SYNCQ9H7C4 482 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 PREBQ9HCU5 417 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 PPARGC1AQ9UBK2 798 aaKnown RBP8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 VPS51Q9UID3 782 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 VPS28Q9UK41 221 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 DMTF1Q9Y222 760 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 SIK3Q9Y2K2 1263 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 PCDHGA1Q9Y5H4 931 aa8.59□□□□□ -1.03
SMARCB1-207ENST00000491967 ADAMTS20P59510 1910 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms