RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 SYT5O00445 386 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 HLA-DQA2P01906 255 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 GYS1P13807 737 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 PKMP14618 531 aaKnown RBP4.14□□□□□ -1.75
HMGN1-218ENST00000490032 MT3P25713 68 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 PCYT1AP49585 367 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 SHBQ15464 509 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 C5orf22Q49AR2 442 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 FNBP1LQ5T0N5 605 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 FAM171A1Q5VUB5 890 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 XRRA1Q6P2D8 792 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 TMEM71Q6P5X7 295 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 RAB11FIP2Q7L804 512 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 SLC44A2Q8IWA5 706 aaPredicted RBP4.14□□□□□ -1.75
HMGN1-218ENST00000490032 ZNF527Q8NB42 609 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 SVIPQ8NHG7 77 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 POLDIP3Q9BY77 421 aaKnown RBP4.14□□□□□ -1.75
HMGN1-218ENST00000490032 PRDM8Q9NQV8 689 aa4.14□□□□□ -1.75
HMGN1-218ENST00000490032 HERC5Q9UII4 1024 aaKnown RBP4.14□□□□□ -1.75
HMGN1-218ENST00000490032 C19orf53Q9UNZ5 99 aaPredicted RBP4.14□□□□□ -1.75
HMGN1-218ENST00000490032 A0A087WV62 115 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 STMND1H3BQB6 276 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 GRM8O00222 908 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 ACTL6BO94805 426 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 PAPSS2O95340 614 aaPredicted RBP4.13□□□□□ -1.75
HMGN1-218ENST00000490032 GLUD1P00367 558 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 UNGP13051 313 aaPredicted RBP4.13□□□□□ -1.75
HMGN1-218ENST00000490032 GNLYP22749 145 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 PDIA3P30101 505 aaKnown RBP4.13□□□□□ -1.75
HMGN1-218ENST00000490032 GLUD2P49448 558 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 CYP2J2P51589 502 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 PNLIPRP1P54315 467 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 CDK18Q07002 472 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 DSC1Q08554 894 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 GALNT1Q10472 559 aaPredicted RBP4.13□□□□□ -1.75
HMGN1-218ENST00000490032 DCTN1Q14203 1278 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 NFATC4Q14934 902 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 PFKFB4Q16877 469 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 ZACNQ401N2 412 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 PGBD2Q6P3X8 592 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 MTFR2Q6P444 385 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 RINLQ6ZS11 566 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 Q6ZSV7 163 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 Q6ZTC4 211 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 LRRC57Q8N9N7 239 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 FRG2BQ96QU4 278 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 ABHD16BQ9H3Z7 469 aa4.13□□□□□ -1.75
HMGN1-218ENST00000490032 SCN5AQ14524 2016 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 NPIPB13A6NJU9 1138 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 NPIPB5A8MRT5 1133 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 NPIPB4C9JG80 1138 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 MS4A18H0YCH9 400 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 KRT86O43790 486 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 SKAP2O75563 359 aaPredicted RBP4.12□□□□□ -1.75
HMGN1-218ENST00000490032 CYP21A2P08686 494 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 MYZAPP0CAP1 466 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 PRKCHP24723 683 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 TYK2P29597 1187 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 SERPINF1P36955 418 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 AP2B1P63010 937 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 KRT81Q14533 505 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 GALNTL6Q49A17 601 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 C8orf82Q6P1X6 216 aaPredicted RBP4.12□□□□□ -1.75
HMGN1-218ENST00000490032 ZNF367Q7RTV3 350 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 SCAMP5Q8TAC9 235 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 HDAC7Q8WUI4 952 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 ADAMTS14Q8WXS8 1223 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 CPT1BQ92523 772 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 ZNF333Q96JL9 665 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 PIGSQ96S52 555 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 TM6SF1Q9BZW5 370 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 WDR12Q9GZL7 423 aaKnown RBP4.12□□□□□ -1.75
HMGN1-218ENST00000490032 PABPC3Q9H361 631 aaKnown RBP4.12□□□□□ -1.75
HMGN1-218ENST00000490032 SLC25A13Q9UJS0 675 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 RCE1Q9Y256 329 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 MST1RQ04912 1400 aa4.12□□□□□ -1.75
HMGN1-218ENST00000490032 TMEM247A6NEH6 219 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 SAC3D1A6NKF1 404 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 VWA5AO00534 786 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 HNRNPRO43390 633 aaKnown RBP4.11□□□□□ -1.75
HMGN1-218ENST00000490032 TMCC1O94876 653 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 SOX30O94993 753 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 AVPR1AP37288 418 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 PMS2P54278 862 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 ALKBH1Q13686 389 aaKnown RBP4.11□□□□□ -1.75
HMGN1-218ENST00000490032 TDRD12Q587J7 1177 aaKnown RBP4.11□□□□□ -1.75
HMGN1-218ENST00000490032 FSCBQ5H9T9 825 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 DGAT2L7PQ6IED9 249 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 LIN54Q6MZP7 749 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 TOGARAM2Q6ZUX3 1019 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 SCN4BQ8IWT1 228 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 ZDHHC23Q8IYP9 409 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 TMEM163Q8TC26 289 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 ARRDC3Q96B67 414 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 BRD8Q9H0E9 1235 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 ZNF700Q9H0M5 742 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 VPS33BQ9H267 617 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 ELAC1Q9H777 363 aaKnown RBP4.11□□□□□ -1.75
HMGN1-218ENST00000490032 TMLHEQ9NVH6 421 aa4.11□□□□□ -1.75
HMGN1-218ENST00000490032 NDUFAF4Q9P032 175 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms