RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 GOT1P17174 413 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 ERCC2P18074 760 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 NDUFV2P19404 249 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 SERPINB6P35237 376 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 PLA2G5P39877 138 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 P2RY2P41231 377 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 CTSOP43234 321 aaPredicted RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 SSR1P43307 286 aaKnown RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 SERPINH1P50454 418 aaKnown RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 COPAP53621 1224 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 SERINC3Q13530 473 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 MESDQ14696 234 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 IFI16Q16666 785 aaKnown RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 SMTNL2Q2TAL5 461 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 KCNT1Q5JUK3 1230 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 SPDYCQ5MJ68 293 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 DAB2IPQ5VWQ8 1189 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 AFMIDQ63HM1 303 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 ZNF776Q68DI1 518 aaPredicted RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 HEATR6Q6AI08 1181 aaKnown RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 IL31Q6EBC2 164 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 SLC36A4Q6YBV0 504 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 DSG4Q86SJ6 1040 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 PLPP6Q8IY26 295 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 FRS2Q8WU20 508 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 UBE2Q2Q8WVN8 375 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 ANP32BQ92688 251 aaKnown RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 PRCCQ92733 491 aaPredicted RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 NKD2Q969F2 451 aaPredicted RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 ZC3H10Q96K80 434 aaKnown RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 CSPG4P5Q96PW8 444 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 MAGEB5Q9BZ81 275 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 RSPH9Q9H1X1 276 aaPredicted RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 LRRC19Q9H756 370 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 PCDH18Q9HCL0 1135 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 PRSS16Q9NQE7 514 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 NDFIP2Q9NV92 336 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 POLR3BQ9NW08 1133 aaPredicted RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 CWC15Q9P013 229 aaKnown RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 USP36Q9P275 1121 aaKnown RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 DNAI1Q9UI46 699 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 RAB23Q9ULC3 237 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 REXO2Q9Y3B8 237 aaKnown RBP11.33□□□□□ -0.6
CPSF7-212ENST00000489728 RAD54BQ9Y620 910 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 R4GN57 208 aa11.33□□□□□ -0.6
CPSF7-212ENST00000489728 EML5Q05BV3 1969 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 ARHGAP42A6NI28 874 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 CBX4O00257 560 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 DCLK1O15075 740 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 PSTPIP1O43586 416 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 LMNAP02545 664 aaKnown RBP11.32□□□□□ -0.6
CPSF7-212ENST00000489728 SRCP12931 536 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 HLA-EP13747 358 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 OXTRP30559 389 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 NOP2P46087 812 aaKnown RBP11.32□□□□□ -0.6
CPSF7-212ENST00000489728 STK19P49842 368 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-212ENST00000489728 ARSEP51690 589 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 CDH6P55285 790 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 ARF5P84085 180 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 KIF5AQ12840 1032 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 KRT81Q14533 505 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 TTC31Q49AM3 519 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-212ENST00000489728 INO80DQ53TQ3 878 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-212ENST00000489728 C9orf64Q5T6V5 341 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 TMCO4Q5TGY1 634 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 TXNRD3NBQ6F5E7 133 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 TMCO3Q6UWJ1 677 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 KIAA1328Q86T90 577 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 TMPRSS6Q8IU80 811 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 LRRC49Q8IUZ0 686 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 RHOT1Q8IXI2 618 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 PGBD3Q8N328 593 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 PCDH20Q8N6Y1 951 aaKnown RBP11.32□□□□□ -0.6
CPSF7-212ENST00000489728 ATP11CQ8NB49 1132 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 OR7D4Q8NG98 312 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 FAF2Q96CS3 445 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 SIPA1Q96FS4 1042 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 LOXL4Q96JB6 756 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 RPL10LQ96L21 214 aaKnown RBP11.32□□□□□ -0.6
CPSF7-212ENST00000489728 SPON2Q9BUD6 331 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 TSGA10Q9BZW7 698 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 MKRN2Q9H000 416 aaKnown RBP11.32□□□□□ -0.6
CPSF7-212ENST00000489728 PCED1AQ9H1Q7 454 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 NOL6Q9H6R4 1146 aaKnown RBP11.32□□□□□ -0.6
CPSF7-212ENST00000489728 DDX56Q9NY93 547 aaKnown RBP11.32□□□□□ -0.6
CPSF7-212ENST00000489728 RAPGEFL1Q9UHV5 662 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 SLCO3A1Q9UIG8 710 aa11.32□□□□□ -0.6
CPSF7-212ENST00000489728 FARP1Q9Y4F1 1045 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-212ENST00000489728 VPS13AQ96RL7 3174 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 TMEM110-MUSTN1A8MSY1 372 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 TTC34A8MYJ7 566 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 RASA4BC9J798 803 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 RASA4O43374 803 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 HRO43593 1189 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 SPOPO43791 374 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 BUB1BO60566 1050 aaPredicted RBP11.31□□□□□ -0.6
CPSF7-212ENST00000489728 SNAP91O60641 907 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 SIN3BO75182 1162 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 RHOBTB1O94844 696 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 ADH1BP00325 375 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms