RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 YTHDF3Q7Z739 585 aaKnown RBP17.87■□□□□ 0.45
NPHP4-209ENST00000489180 PSTKQ8IV42 348 aaKnown RBP17.87■□□□□ 0.45
NPHP4-209ENST00000489180 KBTBD2Q8IY47 623 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 SERPINB11Q96P15 392 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 NDNQ99608 321 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 AAASQ9NRG9 546 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 IQGAP1P46940 1657 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 VPS4BO75351 444 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 TPP2P29144 1249 aaPredicted RBP17.87■□□□□ 0.45
NPHP4-209ENST00000489180 NOS3P29474 1203 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 MMP13P45452 471 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 DEFB128Q7Z7B8 93 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 ZNF605Q86T29 641 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 RGS14O43566 566 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 AVILO75366 819 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 ALDH2P05091 517 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 ATP5BP06576 529 aaKnown RBP17.87■□□□□ 0.45
NPHP4-209ENST00000489180 CLTBP09497 229 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 ANPEPP15144 967 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 S100A3P33764 101 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 MAGEA10P43363 369 aaPredicted RBP17.87■□□□□ 0.45
NPHP4-209ENST00000489180 FMO1Q01740 532 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 SLC15A2Q16348 729 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 FAM171A1Q5VUB5 890 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 DUPD1Q68J44 220 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 B3GNT6Q6ZMB0 384 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 NETO2Q8NC67 525 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 ACTRT2Q8TDY3 377 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 DNAJC19Q96DA6 116 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 FBXO44Q9H4M3 255 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 KCNMB3Q9NPA1 279 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 ATXN2Q99700 1313 aaKnown RBP17.87■□□□□ 0.45
NPHP4-209ENST00000489180 PEX11AO75192 247 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 EIF2S1P05198 315 aaKnown RBP17.87■□□□□ 0.45
NPHP4-209ENST00000489180 CCDC166P0CW27 439 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 TYMPP19971 482 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 GLRA2P23416 452 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 GRIA4P48058 902 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 SERPINH1P50454 418 aaKnown RBP17.87■□□□□ 0.45
NPHP4-209ENST00000489180 PDK3Q15120 406 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 NIPA1Q7RTP0 329 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 PURBQ96QR8 312 aaKnown RBP17.87■□□□□ 0.45
NPHP4-209ENST00000489180 CATSPERZQ9NTU4 200 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 TMEM51Q9NW97 253 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 RRN3Q9NYV6 651 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 A0A0A0MRY4 1105 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 LYPLA1O75608 230 aaPredicted RBP17.86■□□□□ 0.45
NPHP4-209ENST00000489180 PCDH8O95206 1070 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 ATN1P54259 1190 aaPredicted RBP17.86■□□□□ 0.45
NPHP4-209ENST00000489180 KLHL17Q6TDP4 642 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 SYT12Q8IV01 421 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 SPATA13Q96N96 652 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 MECRQ9BV79 373 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 MOXD2PA6NHM9 499 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 BFSP2Q13515 415 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 QPCTQ16769 361 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 ZC3H12AQ5D1E8 599 aaKnown RBP17.86■□□□□ 0.45
NPHP4-209ENST00000489180 NEPROQ6NW34 567 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 MREGQ8N565 214 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 EIF1ADQ8N9N8 165 aaKnown RBP17.86■□□□□ 0.45
NPHP4-209ENST00000489180 FHDC1Q9C0D6 1143 aaPredicted RBP17.86■□□□□ 0.45
NPHP4-209ENST00000489180 FAM192AQ9GZU8 254 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 CNGB3Q9NQW8 809 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 ZMYND8Q9ULU4 1186 aaPredicted RBP17.86■□□□□ 0.45
NPHP4-209ENST00000489180 LOC100506127A0A0U1RQW1 187 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 RBAK-RBAKDNI3L0D1 243 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 AGRPO00253 132 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 TGFB3P10600 412 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 LRMDAQ9H2I8 198 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 ASTN2O75129 1339 aaPredicted RBP17.86■□□□□ 0.45
NPHP4-209ENST00000489180 A0A1W2PPM1 405 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 TBKBP1A7MCY6 615 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 NFICP08651 508 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 YWHAQP27348 245 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 TSNQ15631 228 aaKnown RBP17.86■□□□□ 0.45
NPHP4-209ENST00000489180 PDK4Q16654 411 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 FBXW8Q8N3Y1 598 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 BPIFB6Q8NFQ5 453 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 DNAJB14Q8TBM8 379 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 OPTCQ9UBM4 332 aa17.86■□□□□ 0.45
NPHP4-209ENST00000489180 MAP2P11137 1827 aaKnown RBP17.86■□□□□ 0.45
NPHP4-209ENST00000489180 FAM237AA0A1B0GTK4 181 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 IFRD1O00458 451 aaPredicted RBP17.85■□□□□ 0.45
NPHP4-209ENST00000489180 MYL12BO14950 172 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 KCNH1O95259 989 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 GRK4P32298 578 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 TNFSF9P41273 254 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 FAM71AQ8IYT1 594 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 C8orf59Q8N0T1 100 aaPredicted RBP17.85■□□□□ 0.45
NPHP4-209ENST00000489180 UCMAQ8WVF2 138 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 LRRC39Q96DD0 335 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 COQ7Q99807 217 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 SNRNP25Q9BV90 132 aaKnown RBP17.85■□□□□ 0.45
NPHP4-209ENST00000489180 KLQ9UEF7 1012 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 OR12D3Q9UGF7 316 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 TK2O00142 265 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 LTA4HP09960 611 aaKnown RBP17.85■□□□□ 0.45
NPHP4-209ENST00000489180 CD86P42081 329 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 MFSD10Q14728 455 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 ENKURQ8TC29 256 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms