RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 KRT3P12035 628 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 SRCP12931 536 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 GOT1P17174 413 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 C5AR1P21730 350 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 RFC1P35251 1148 aaPredicted RBP14.37□□□□□ -0.11
VTI1A-206ENST00000489142 DRD3P35462 400 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 AFF3P51826 1226 aaKnown RBP14.37□□□□□ -0.11
VTI1A-206ENST00000489142 ADPRHP54922 357 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 KIF19Q2TAC6 998 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 HLA-BQ31612 363 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 FAM72AQ5TYM5 149 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 FAM72DQ6L9T8 149 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 RWDD4Q6NW29 188 aaKnown RBP14.37□□□□□ -0.11
VTI1A-206ENST00000489142 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.37□□□□□ -0.11
VTI1A-206ENST00000489142 MON1BQ7L1V2 547 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 ARCQ7LC44 396 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 FAM72BQ86X60 149 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 PHF13Q86YI8 300 aaPredicted RBP14.37□□□□□ -0.11
VTI1A-206ENST00000489142 ATP11CQ8NB49 1132 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 C1orf74Q96LT6 269 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 SLC6A18Q96N87 628 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 HAPLN3Q96S86 360 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 BPIFA3Q9BQP9 254 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 SPON2Q9BUD6 331 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 SLC32A1Q9H598 525 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 EBF2Q9HAK2 575 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 RTN4Q9NQC3 1192 aaKnown RBP14.37□□□□□ -0.11
VTI1A-206ENST00000489142 TAS2R14Q9NYV8 317 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 ZNF212Q9UDV6 495 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 ANGPTL2Q9UKU9 493 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 SNX11Q9Y5W9 270 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 ACTL7AQ9Y615 435 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 KNL1Q8NG31 2342 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 SYCE3A1L190 88 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 LRRC53A6NM62 1247 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 TMCO5BA8MYB1 307 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 RNF103O00237 685 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 CBX4O00257 560 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 CTSLP07711 333 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 GPD1P21695 349 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 CD27P26842 260 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 ADRA1BP35368 520 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 PTPN9P43378 593 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 ZNF165P49910 485 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 HDAC4P56524 1084 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 PPP2CBP62714 309 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 PPP2CAP67775 309 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 KRT83P78385 493 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 SIM1P81133 766 aaPredicted RBP14.36□□□□□ -0.11
VTI1A-206ENST00000489142 C6orf118Q5T5N4 469 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 WDR59Q6PJI9 974 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 SETD3Q86TU7 594 aaPredicted RBP14.36□□□□□ -0.11
VTI1A-206ENST00000489142 OR2T34Q8NGX1 318 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 PIP4K2CQ8TBX8 421 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 OR8D1Q8WZ84 308 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 BAP1Q92560 729 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 NAP1L5Q96NT1 182 aaPredicted RBP14.36□□□□□ -0.11
VTI1A-206ENST00000489142 MCEEQ96PE7 176 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 PPP1R9BQ96SB3 815 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 FUCA2Q9BTY2 467 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 C2orf49Q9BVC5 232 aaPredicted RBP14.36□□□□□ -0.11
VTI1A-206ENST00000489142 ZYG11BQ9C0D3 744 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 TNKS2Q9H2K2 1166 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 NDFIP2Q9NV92 336 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 OR12D3Q9UGF7 316 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 ADAMTS1Q9UHI8 967 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 FZD4Q9ULV1 537 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 ANKRD6Q9Y2G4 727 aa14.36□□□□□ -0.11
VTI1A-206ENST00000489142 TPRP12270 2363 aaKnown RBP14.36□□□□□ -0.11
VTI1A-206ENST00000489142 ACACBO00763 2458 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 FRYQ5TBA9 3013 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 CHD5Q8TDI0 1954 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 LRRC72A6NJI9 287 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 SMTNL1A8MU46 457 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 WNT9AO14904 365 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 CCP110O43303 1012 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 ATMINO43313 823 aaPredicted RBP14.35□□□□□ -0.11
VTI1A-206ENST00000489142 CER1O95813 267 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 CALB1P05937 261 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 FERP16591 822 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 MAT2AP31153 395 aaKnown RBP14.35□□□□□ -0.11
VTI1A-206ENST00000489142 RPL7AP62424 266 aaKnown RBP14.35□□□□□ -0.11
VTI1A-206ENST00000489142 IL9RQ01113 521 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 CNTN1Q12860 1018 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 TEAD4Q15561 434 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 E4F1Q66K89 784 aaPredicted RBP14.35□□□□□ -0.11
VTI1A-206ENST00000489142 DNAJC24Q6P3W2 148 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 IRF2BP2Q7Z5L9 587 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 ADAT2Q7Z6V5 191 aaKnown RBP14.35□□□□□ -0.11
VTI1A-206ENST00000489142 NAXDQ8IW45 347 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 PYROXD2Q8N2H3 581 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 DCAF4L2Q8NA75 395 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 CHST14Q8NCH0 376 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 C3orf20Q8ND61 904 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 GRIN3AQ8TCU5 1115 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 ZDHHC5Q9C0B5 715 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 ATP13A1Q9HD20 1204 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 DNAI1Q9UI46 699 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 HS3ST2Q9Y278 367 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 MAP1BP46821 2468 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms