RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 RENBPP51606 427 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 OXCT1P55809 520 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 FAM193AP78312 1265 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 CDK16Q00536 496 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 IL10RBQ08334 325 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 GPS2Q13227 327 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 ZNF235Q14590 738 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 TPSAB1Q15661 275 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 ZNF77Q15935 545 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 TEX44Q53QW1 395 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 DNAJC21Q5F1R6 531 aaKnown RBP10.23□□□□□ -0.77
USP11-211ENST00000489111 MPP7Q5T2T1 576 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 TMCO4Q5TGY1 634 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 RNF219Q5W0B1 726 aaPredicted RBP10.23□□□□□ -0.77
USP11-211ENST00000489111 DENND2CQ68D51 928 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 CES5AQ6NT32 575 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 TMEM184AQ6ZMB5 413 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 EP400NLQ6ZTU2 488 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 TRMT10CQ7L0Y3 403 aaKnown RBP10.23□□□□□ -0.77
USP11-211ENST00000489111 ARID3BQ8IVW6 561 aaPredicted RBP10.23□□□□□ -0.77
USP11-211ENST00000489111 NPAS3Q8IXF0 933 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 BBS5Q8N3I7 341 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 CELF5Q8N6W0 485 aaKnown RBP10.23□□□□□ -0.77
USP11-211ENST00000489111 ARHGEF2Q92974 986 aaKnown RBP10.23□□□□□ -0.77
USP11-211ENST00000489111 FATE1Q969F0 183 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 TEKT5Q96M29 485 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 ZSWIM3Q96MP5 696 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 ZNF599Q96NL3 588 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 RBM15Q96T37 977 aaKnown RBP eCLIP10.23□□□□□ -0.77
USP11-211ENST00000489111 PHACTR1Q9C0D0 580 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 PRO3102Q9H379 93 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 XAB2Q9HCS7 855 aaKnown RBP10.23□□□□□ -0.77
USP11-211ENST00000489111 ATP13A1Q9HD20 1204 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 SAYSD1Q9NPB0 183 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 EIF2B3Q9NR50 452 aaKnown RBP10.23□□□□□ -0.77
USP11-211ENST00000489111 RBM22Q9NW64 420 aaKnown RBP eCLIP10.23□□□□□ -0.77
USP11-211ENST00000489111 LMCD1Q9NZU5 365 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 IGSF9Q9P2J2 1179 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 TBC1D30Q9Y2I9 924 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 ERI2A8K979 691 aaKnown RBP10.22□□□□□ -0.77
USP11-211ENST00000489111 J3KR12 359 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 GFRA2O00451 464 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 EIF3HO15372 352 aaKnown RBP eCLIP10.22□□□□□ -0.77
USP11-211ENST00000489111 ZBTB24O43167 697 aaPredicted RBP10.22□□□□□ -0.77
USP11-211ENST00000489111 TCF3P15923 654 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 ACVRL1P37023 503 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 HSD17B3P37058 310 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 MMP13P45452 471 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 RGS19P49795 217 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 PDIA2Q13087 525 aaKnown RBP10.22□□□□□ -0.77
USP11-211ENST00000489111 HNRNPDQ14103 355 aaKnown RBP10.22□□□□□ -0.77
USP11-211ENST00000489111 CBX2Q14781 532 aaPredicted RBP10.22□□□□□ -0.77
USP11-211ENST00000489111 LRIT3Q3SXY7 679 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 BBS9Q3SYG4 887 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 SPDYCQ5MJ68 293 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 SYCP2LQ5T4T6 812 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 MARC1Q5VT66 337 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 ALS2CLQ60I27 953 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 CXorf57Q6NSI4 855 aaKnown RBP10.22□□□□□ -0.77
USP11-211ENST00000489111 TPGS1Q6ZTW0 290 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 TSEN2Q8NCE0 465 aaKnown RBP10.22□□□□□ -0.77
USP11-211ENST00000489111 MCUQ8NE86 351 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 OR7D4Q8NG98 312 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 MAML1Q92585 1016 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 OTUB2Q96DC9 234 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 PWWP2AQ96N64 755 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 TTC25Q96NG3 672 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 IL12RB2Q99665 862 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 PABPC3Q9H361 631 aaKnown RBP10.22□□□□□ -0.77
USP11-211ENST00000489111 GLOD4Q9HC38 313 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 GDE1Q9NZC3 331 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 UBA2Q9UBT2 640 aaPredicted RBP10.22□□□□□ -0.77
USP11-211ENST00000489111 VPS28Q9UK41 221 aa10.22□□□□□ -0.77
USP11-211ENST00000489111 GREB1Q4ZG55 1949 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 A0A0D9SEW6 157 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 TCRBV7S3A2A0A539 114 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 CBX4O00257 560 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 MAP2K7O14733 419 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 PSMD3O43242 534 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 KDELR3O43731 214 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 SASH3O75995 380 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 ANXA9O76027 345 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 HLA-DQB2P05538 268 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 HOXD9P28356 352 aaPredicted RBP10.21□□□□□ -0.77
USP11-211ENST00000489111 WEE1P30291 646 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 MAGEA4P43358 317 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 IFNAR2P48551 515 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 ITKQ08881 620 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 IFFO1Q0D2I5 559 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 ADAM15Q13444 863 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 LBRQ14739 615 aaKnown RBP10.21□□□□□ -0.77
USP11-211ENST00000489111 HSP90B2PQ58FF3 399 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 FAM78AQ5JUQ0 283 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 ATAT1Q5SQI0 421 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 FAM182AQ5T1J6 154 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 SYCE2Q6PIF2 218 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 LEKR1Q6ZMV7 388 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 ZBED8Q8IZ13 594 aa10.21□□□□□ -0.77
USP11-211ENST00000489111 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.21□□□□□ -0.77
USP11-211ENST00000489111 GOLGA6L1Q8N7Z2 621 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms