RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 THAP4Q8WY91 577 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 GOLGA1Q92805 767 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 ZNF778Q96MU6 729 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 DDX23Q9BUQ8 820 aaKnown RBP4.8□□□□□ -1.64
ITGB1-214ENST00000488427 GATA5Q9BWX5 397 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-214ENST00000488427 TAF1DQ9H5J8 278 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-214ENST00000488427 PDE11AQ9HCR9 933 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 TMEM184CQ9NVA4 438 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 KIF17Q9P2E2 1029 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 SUFUQ9UMX1 484 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 ARHGAP5Q13017 1502 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 NUP153P49790 1475 aaKnown RBP4.8□□□□□ -1.64
ITGB1-214ENST00000488427 WDR90Q96KV7 1748 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 MYOM1P52179 1685 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 PLXNC1O60486 1568 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 SAMD9Q5K651 1589 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 NRKQ7Z2Y5 1582 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 KIR2DS5A0A0G2JLQ3 304 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 KIR2DS3K7RE56 304 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 HOXB9P17482 250 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-214ENST00000488427 KRTAP10-11P60412 298 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 ALG10Q5BKT4 473 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 ALG10BQ5I7T1 473 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 MANEAQ5SRI9 462 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 FAM83BQ5T0W9 1011 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.79□□□□□ -1.64
ITGB1-214ENST00000488427 MYCT1Q8N699 235 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 PTGR2Q8N8N7 351 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-214ENST00000488427 STT3BQ8TCJ2 826 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 MCRS1Q96EZ8 462 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 NLRP4Q96MN2 994 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 PSMD1Q99460 953 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 HERPUD2Q9BSE4 406 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 FAM167BQ9BTA0 163 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 SORBS1Q9BX66 1292 aaKnown RBP4.79□□□□□ -1.64
ITGB1-214ENST00000488427 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-214ENST00000488427 CDC42BPBQ9Y5S2 1711 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 RREB1Q92766 1687 aa4.79□□□□□ -1.64
ITGB1-214ENST00000488427 NUP188Q5SRE5 1749 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 PZPP20742 1482 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.78□□□□□ -1.64
ITGB1-214ENST00000488427 M0QYT0 321 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 RHODO00212 210 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 IFRD1O00458 451 aaPredicted RBP4.78□□□□□ -1.64
ITGB1-214ENST00000488427 GYS1P13807 737 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 TRAPPC10P48553 1259 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 PAPOLAP51003 745 aaKnown RBP4.78□□□□□ -1.64
ITGB1-214ENST00000488427 RBM5P52756 815 aaKnown RBP eCLIP4.78□□□□□ -1.64
ITGB1-214ENST00000488427 ADPRHP54922 357 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 ANO1Q5XXA6 986 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 DDIASQ8IXT1 998 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 SCARB1Q8WTV0 552 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 WDR83Q9BRX9 315 aaKnown RBP4.78□□□□□ -1.64
ITGB1-214ENST00000488427 MECRQ9BV79 373 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 OSBPL5Q9H0X9 879 aaPredicted RBP4.78□□□□□ -1.64
ITGB1-214ENST00000488427 FZD3Q9NPG1 666 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 RNF146Q9NTX7 359 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 AFG3L2Q9Y4W6 797 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 PCDHA10Q9Y5I2 948 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 SETD5Q9C0A6 1442 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 MAST1Q9Y2H9 1570 aa4.78□□□□□ -1.64
ITGB1-214ENST00000488427 CHD2O14647 1828 aaKnown RBP4.77□□□□□ -1.65
ITGB1-214ENST00000488427 MROH1Q8NDA8 1641 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 GAGE12JA6NER3 117 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 KCNJ18B7U540 433 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 E7EVH7 732 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 H0Y3Z8 333 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 ADAM10O14672 748 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 TLX3O43711 291 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-214ENST00000488427 GSTM2P28161 218 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 RPS6KA3P51812 740 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 SHC2P98077 582 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 MTX1Q13505 466 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 TIGD6Q17RP2 521 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 GALNTL6Q49A17 601 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 RUNDC3AQ59EK9 446 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 C6orf10Q5SRN2 563 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 MMP21Q8N119 569 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 ARL14EPQ8N8R7 260 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-214ENST00000488427 SCAMP5Q8TAC9 235 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 NOC3LQ8WTT2 800 aaKnown RBP4.77□□□□□ -1.65
ITGB1-214ENST00000488427 ATP2A3Q93084 1043 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 ADAD1Q96M93 576 aaKnown RBP4.77□□□□□ -1.65
ITGB1-214ENST00000488427 ZNF347Q96SE7 839 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 ARPC5LQ9BPX5 153 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 PIMREGQ9BSJ6 248 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 ISCA1Q9BUE6 129 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 TRIM31Q9BZY9 425 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 G6PC2Q9NQR9 355 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 THSD1Q9NS62 852 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.77□□□□□ -1.65
ITGB1-214ENST00000488427 LAMP3Q9UQV4 416 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 DTX4Q9Y2E6 619 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 ADGRB2O60241 1585 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 GLI3P10071 1580 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 DLC1Q96QB1 1528 aa4.77□□□□□ -1.65
ITGB1-214ENST00000488427 A2MP01023 1474 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 CAMSAP2Q08AD1 1489 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 TRBV5-3A0A0A0MS03 114 aa4.76□□□□□ -1.65
ITGB1-214ENST00000488427 AGAP5A6NIR3 686 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms