RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 HMGB1P1B2RPK0 211 aaPredicted RBP13.01□□□□□ -0.33
NELFE-209ENST00000488426 POLR3GO15318 223 aaPredicted RBP13.01□□□□□ -0.33
NELFE-209ENST00000488426 CCL16O15467 120 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 PAPLNO95428 1278 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 METTL18O95568 372 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 C1RP00736 705 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 APRTP07741 180 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 GOLGA6DP0CG33 693 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 TSHRP16473 764 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 CCNCP24863 283 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 SLC11A2P49281 568 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 HARS2P49590 506 aaKnown RBP13.01□□□□□ -0.33
NELFE-209ENST00000488426 NDST2P52849 883 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 TTMPQ5BVD1 217 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 IER5LQ5T953 404 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 AGBL2Q5U5Z8 902 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 RTL10Q7L3V2 364 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 ZNF567Q8N184 647 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 UMODL1-AS1Q8N2C9 162 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 ATPAF2Q8N5M1 289 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 TDRD5Q8NAT2 981 aaKnown RBP13.01□□□□□ -0.33
NELFE-209ENST00000488426 NETO2Q8NC67 525 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 ARL8AQ96BM9 186 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 ATP6V1G3Q96LB4 118 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 C9orf72Q96LT7 481 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 PRKD2Q9BZL6 878 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 HCFC1R1Q9NWW0 138 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 GOLGA6AQ9NYA3 693 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 SEPT10Q9P0V9 454 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 VPS18Q9P253 973 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 SHROOM3Q8TF72 1996 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 NUP205Q92621 2012 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 USP34Q70CQ2 3546 aa13.01□□□□□ -0.33
NELFE-209ENST00000488426 E7EVH7 732 aa13□□□□□ -0.33
NELFE-209ENST00000488426 NRG2O14511 850 aaPredicted RBP13□□□□□ -0.33
NELFE-209ENST00000488426 ACSL4O60488 711 aa13□□□□□ -0.33
NELFE-209ENST00000488426 TCEA3O75764 348 aa13□□□□□ -0.33
NELFE-209ENST00000488426 LRG1P02750 347 aa13□□□□□ -0.33
NELFE-209ENST00000488426 F11P03951 625 aa13□□□□□ -0.33
NELFE-209ENST00000488426 C8AP07357 584 aa13□□□□□ -0.33
NELFE-209ENST00000488426 PTPN3P26045 913 aa13□□□□□ -0.33
NELFE-209ENST00000488426 GAD2Q05329 585 aa13□□□□□ -0.33
NELFE-209ENST00000488426 FNBP1LQ5T0N5 605 aa13□□□□□ -0.33
NELFE-209ENST00000488426 UBAP2Q5T6F2 1119 aaKnown RBP13□□□□□ -0.33
NELFE-209ENST00000488426 FAXCQ5TGI0 409 aa13□□□□□ -0.33
NELFE-209ENST00000488426 RAP1GAP2Q684P5 730 aa13□□□□□ -0.33
NELFE-209ENST00000488426 ITPRIPL1Q6GPH6 555 aa13□□□□□ -0.33
NELFE-209ENST00000488426 FBXL22Q6P050 247 aa13□□□□□ -0.33
NELFE-209ENST00000488426 GRASPQ7Z6J2 395 aaPredicted RBP13□□□□□ -0.33
NELFE-209ENST00000488426 CHSY1Q86X52 802 aa13□□□□□ -0.33
NELFE-209ENST00000488426 ZBED8Q8IZ13 594 aa13□□□□□ -0.33
NELFE-209ENST00000488426 CELF6Q96J87 481 aaKnown RBP13□□□□□ -0.33
NELFE-209ENST00000488426 MPP6Q9NZW5 540 aa13□□□□□ -0.33
NELFE-209ENST00000488426 KLHL8Q9P2G9 620 aaPredicted RBP13□□□□□ -0.33
NELFE-209ENST00000488426 DENND4CQ5VZ89 1909 aa13□□□□□ -0.33
NELFE-209ENST00000488426 A0A087WUV0 522 aaPredicted RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 KCNK1O00180 336 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 DFFAO00273 331 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 IVLP07476 585 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 TACR2P21452 398 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 SARNPP82979 210 aaKnown RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 STAT4Q14765 748 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 FASTKD3Q14CZ7 662 aaKnown RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 C5orf22Q49AR2 442 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 TEX44Q53QW1 395 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 C6orf118Q5T5N4 469 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 NADSYN1Q6IA69 706 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 TIGD7Q6NT04 549 aaPredicted RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 TMEM150AQ86TG1 271 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 ELMOD1Q8N336 334 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 ATP11CQ8NB49 1132 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 PYROXD1Q8WU10 500 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 FATE1Q969F0 183 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 PBXIP1Q96AQ6 731 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 LRRC39Q96DD0 335 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 PGM2Q96G03 612 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 SERPINB12Q96P63 405 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 CCDC77Q9BR77 488 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 RPP25Q9BUL9 199 aaKnown RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 KLF16Q9BXK1 252 aaPredicted RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 SLC39A8Q9C0K1 460 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 KCNK12Q9HB15 430 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 PIDD1Q9HB75 910 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 IL21Q9HBE4 155 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 XAB2Q9HCS7 855 aaKnown RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 ZNF334Q9HCZ1 680 aaPredicted RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 NYNRINQ9P2P1 1898 aaKnown RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 F5H5T6 163 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 NARSO43776 548 aaKnown RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 STC2O76061 302 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 LATS1O95835 1130 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 MLNP12872 115 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 GBP2P32456 591 aaPredicted RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 PHBP35232 272 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 MAPKAPK2P49137 400 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 IFI35P80217 286 aaPredicted RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 SIGLEC14Q08ET2 396 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 BBS9Q3SYG4 887 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 MSS51Q4VC12 460 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 CCDC38Q502W7 563 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms