RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ZDHHC7Q9NXF8 308 aa4.33□□□□□ -1.72
CCDC66-221ENST00000487739 CNTN6Q9UQ52 1028 aa4.33□□□□□ -1.72
CCDC66-221ENST00000487739 LINC01565O15544 149 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 ASAP2O43150 1006 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 HLA-DQA2P01906 255 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 NBPF7P0C2Y1 421 aaPredicted RBP4.32□□□□□ -1.72
CCDC66-221ENST00000487739 MYZAPP0CAP1 466 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 UNGP13051 313 aaPredicted RBP4.32□□□□□ -1.72
CCDC66-221ENST00000487739 PDLIM4P50479 330 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 TMPRSS3P57727 454 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 ERVFC1-1P60608 527 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 HLFQ16534 295 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 BTBD16Q32M84 506 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 TBRG1Q3YBR2 411 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 TRIM60Q495X7 471 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 C5orf22Q49AR2 442 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 HEPHL1Q6MZM0 1159 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 TMEM71Q6P5X7 295 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 CLIP4Q8N3C7 705 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 OR14A16Q8NHC5 309 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 PARD3BQ8TEW8 1205 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 RSC1A1Q92681 617 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 RTP4Q96DX8 246 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 IL36RNQ9UBH0 155 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 SLC25A13Q9UJS0 675 aa4.32□□□□□ -1.72
CCDC66-221ENST00000487739 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.31□□□□□ -1.72
CCDC66-221ENST00000487739 AGAP5A6NIR3 686 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 CYSRT1A8MQ03 144 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 TMCC1O94876 653 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 PPP1R3DO95685 299 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 GNLYP22749 145 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 PPP3CCP48454 512 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 PCP4P48539 62 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 CLCN5P51795 746 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 COASYQ13057 564 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 HNF4GQ14541 408 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 PLCB4Q15147 1175 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 KSR2Q6VAB6 950 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.31□□□□□ -1.72
CCDC66-221ENST00000487739 ZNF329Q86UD4 541 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 FJX1Q86VR8 437 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 SYTL1Q8IYJ3 562 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 HORMAD2Q8N7B1 307 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 WFIKKN2Q8TEU8 576 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 FAM216AQ8WUB2 273 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 Q9N2J8 555 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 CHPF2Q9P2E5 772 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 CKAP5Q14008 2032 aa4.31□□□□□ -1.72
CCDC66-221ENST00000487739 A0A087WYN8 130 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 PLSCR5A0PG75 271 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 FAM90A18PA6NE21 464 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 TMEM247A6NEH6 219 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 FAM90A16PA6NEW6 464 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 FAM90A9PA6NNJ1 464 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 EFCAB8A8MWE9 144 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 FAM90A5PA8MXJ8 464 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 PARNO95453 639 aaKnown RBP4.3□□□□□ -1.72
CCDC66-221ENST00000487739 ZBTB11O95625 1053 aaPredicted RBP4.3□□□□□ -1.72
CCDC66-221ENST00000487739 FAM90A15PP0C7V4 464 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 FAM90A14PP0C7W9 464 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 ABCB4P21439 1286 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 PRPH2P23942 346 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 NUDT6P53370 316 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 ATPAF1Q5TC12 328 aaPredicted RBP4.3□□□□□ -1.72
CCDC66-221ENST00000487739 H1FNTQ75WM6 255 aaPredicted RBP4.3□□□□□ -1.72
CCDC66-221ENST00000487739 ARMC9Q7Z3E5 817 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 PALB2Q86YC2 1186 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 FOXP4Q8IVH2 680 aaPredicted RBP4.3□□□□□ -1.72
CCDC66-221ENST00000487739 DEPTORQ8TB45 409 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 SLC35F5Q8WV83 523 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 MYD88Q99836 296 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 HDHD5Q9BXW7 423 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 PDE11AQ9HCR9 933 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 TMEM248Q9NWD8 314 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 KCNG2Q9UJ96 466 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 PHTF1Q9UMS5 762 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 LZTS1Q9Y250 596 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 PCDHA10Q9Y5I2 948 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 SRPRBQ9Y5M8 271 aaKnown RBP4.3□□□□□ -1.72
CCDC66-221ENST00000487739 RAI2Q9Y5P3 530 aa4.3□□□□□ -1.72
CCDC66-221ENST00000487739 AQP12BA6NM10 295 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 PRSS47A8MTI9 375 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 SLC16A5O15375 505 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 GRID2O43424 1007 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 LDB2O43679 373 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 PRKCHP24723 683 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 GSTM2P28161 218 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 AMTP48728 403 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 POU3F1Q03052 451 aaPredicted RBP4.29□□□□□ -1.72
CCDC66-221ENST00000487739 PICALMQ13492 652 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 STARD3Q14849 445 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 ZNF284Q2VY69 593 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 ZACNQ401N2 412 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 KIAA1324Q6UXG2 1013 aaKnown RBP4.29□□□□□ -1.72
CCDC66-221ENST00000487739 CEP76Q8TAP6 659 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 TMEM163Q8TC26 289 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 FAM71BQ8TC56 605 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 TMED6Q8WW62 240 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 TNIP3Q96KP6 325 aa4.29□□□□□ -1.72
CCDC66-221ENST00000487739 FRG2BQ96QU4 278 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms