RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 THAP1Q9NVV9 213 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 SAGE1Q9NXZ1 904 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 CNOT7Q9UIV1 285 aaKnown RBP4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 TBX20Q9UMR3 447 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 LY6G6EA0A0G2JKS1 128 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 TSPAN4O14817 238 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 OAZ2O95190 189 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 LCKP06239 509 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 POLBP06746 335 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 CKMT1AP12532 417 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 ACP5P13686 325 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 ST6GAL1P15907 406 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 ATF7P17544 494 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 CPA2P48052 419 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 CYP2J2P51589 502 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 ADPRHP54922 357 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 RPS13P62277 151 aaKnown RBP4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 GAB1Q13480 694 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 STIM1Q13586 685 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 SEMA3AQ14563 771 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 ISM2Q6H9L7 571 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 AADACL2Q6P093 401 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 ZNF793Q6ZN11 406 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 BBS12Q6ZW61 710 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 TMEM200AQ86VY9 491 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 RFX6Q8HWS3 928 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 LINS1Q8NG48 757 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 STAMQ92783 540 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 ADAD1Q96M93 576 aaKnown RBP4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 PPM1MQ96MI6 270 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 TUBB6Q9BUF5 446 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 NPLQ9BXD5 320 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 CADM1Q9BY67 442 aaKnown RBP4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 UBA5Q9GZZ9 404 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 RMI1Q9H9A7 625 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 JMJD4Q9H9V9 463 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 ARL15Q9NXU5 204 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 ZNF69Q9UC07 566 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 CRYL1Q9Y2S2 319 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 TMEM98Q9Y2Y6 226 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 PKP3Q9Y446 797 aa4.1□□□□□ -1.75
HMGB1P36-201ENST00000487709 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 H3BNX3 289 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 EPB41L2O43491 1005 aaKnown RBP4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 WDHD1O75717 1129 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 AGR2O95994 175 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 PYGLP06737 847 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 CSF1P09603 554 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 RFPL3SP0C7P2 107 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 PEPDP12955 493 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 CD53P19397 219 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 PRPH2P23942 346 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 CIITAP33076 1130 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 PAFAH1B1P43034 410 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 YPEL5P62699 121 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 ARHGAP8P85298 464 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 ID2Q02363 134 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 FOXD4Q12950 439 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 C5orf22Q49AR2 442 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 LRRC24Q50LG9 513 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 ALG10Q5BKT4 473 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 ALG10BQ5I7T1 473 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 WDR45BQ5MNZ6 344 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 INTS11Q5TA45 600 aaKnown RBP4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 RETSATQ6NUM9 610 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 FAM57BQ71RH2 274 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 BRSK2Q8IWQ3 736 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 SCN4BQ8IWT1 228 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 FAM185AQ8N0U4 392 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 VPS52Q8N1B4 723 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 PAQR4Q8N4S7 273 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 TCP11L2Q8N4U5 519 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 RBMXL3Q8N7X1 1067 aaKnown RBP4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 ZNF398Q8TD17 642 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 MAP4K1Q92918 833 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 ATP2A3Q93084 1043 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 CLMNQ96JQ2 1002 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 STN1Q9H668 368 aaKnown RBP4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 VEZTQ9HBM0 779 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 PAPOLBQ9NRJ5 636 aaKnown RBP4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 IRAK4Q9NWZ3 460 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 KLQ9UEF7 1012 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 ARHGAP26Q9UNA1 814 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 DTX4Q9Y2E6 619 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 SQORQ9Y6N5 450 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 LMTK3Q96Q04 1460 aa4.09□□□□□ -1.75
HMGB1P36-201ENST00000487709 A0A1B0GVC2 190 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 NPIPB13A6NJU9 1138 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 NPIPB5A8MRT5 1133 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 NPIPB4C9JG80 1138 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 RRHO14718 337 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 PRPF4O43172 522 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 KAT7O95251 611 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 CYP19A1P11511 503 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 HOXD9P28356 352 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 ELF1P32519 619 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 IDUAP35475 653 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 BYSLQ13895 437 aaKnown RBP4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 ERV3-1Q14264 604 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms