RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 C16orf70Q9BSU1 422 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 F2P00734 622 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 PRKAR2AP13861 404 aaKnown RBP12.02□□□□□ -0.49
TRA2B-214ENST00000487615 NAGLUP54802 743 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 AARS2Q5JTZ9 985 aaKnown RBP12.02□□□□□ -0.49
TRA2B-214ENST00000487615 DPY19L2P1Q6NXN4 242 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 TAPT1Q6NXT6 567 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 TMEM154Q6P9G4 183 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 CLNKQ7Z7G1 428 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 BANPQ8N9N5 519 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 BHMTQ93088 406 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 AFF4Q9UHB7 1163 aaKnown RBP12.02□□□□□ -0.49
TRA2B-214ENST00000487615 FZD10Q9ULW2 581 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 TBKBP1A7MCY6 615 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 CBX4O00257 560 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 PIGNO95427 931 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 TBL3Q12788 808 aaKnown RBP12.01□□□□□ -0.49
TRA2B-214ENST00000487615 CHADLQ6NUI6 762 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 CMC1Q7Z7K0 106 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 NUP93Q8N1F7 819 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 NPLOC4Q8TAT6 608 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 EME1Q96AY2 570 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 PHF21BQ96EK2 531 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 FGD4Q96M96 766 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 MRPL9Q9BYD2 267 aaKnown RBP12.01□□□□□ -0.49
TRA2B-214ENST00000487615 RNF39Q9H2S5 420 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 SCUBE2Q9NQ36 999 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 RNF112Q9ULX5 631 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 AURKCQ9UQB9 309 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 INTS6LQ5JSJ4 861 aaKnown RBP12.01□□□□□ -0.49
TRA2B-214ENST00000487615 SNX30Q5VWJ9 437 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 UBR3Q6ZT12 1888 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 ZNF567Q8N184 647 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 RFWD2Q8NHY2 731 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 TUBGCP3Q96CW5 907 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 POLR1EQ9GZS1 481 aaKnown RBP12.01□□□□□ -0.49
TRA2B-214ENST00000487615 SFMBT1Q9UHJ3 866 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 ORC6Q9Y5N6 252 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 METTL18O95568 372 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 TPBGLP0DKB5 382 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 MBL2P11226 248 aaPredicted RBP12.01□□□□□ -0.49
TRA2B-214ENST00000487615 WASHC5Q12768 1159 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 ILF2Q12905 390 aaKnown RBP12.01□□□□□ -0.49
TRA2B-214ENST00000487615 INPP5AQ14642 412 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 ZDHHC14Q8IZN3 488 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 LGI2Q8N0V4 545 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 KYQ8NBH2 561 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 DQX1Q8TE96 717 aaKnown RBP12.01□□□□□ -0.49
TRA2B-214ENST00000487615 IRGQQ8WZA9 623 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 NCLNQ969V3 563 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 OLFM3Q96PB7 478 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 ACE2Q9BYF1 805 aaPredicted RBP12.01□□□□□ -0.49
TRA2B-214ENST00000487615 ZYG11BQ9C0D3 744 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 PTPRHQ9HD43 1115 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 PRDM5Q9NQX1 630 aaPredicted RBP12.01□□□□□ -0.49
TRA2B-214ENST00000487615 AAASQ9NRG9 546 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 RGS18Q9NS28 235 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 RIC8BQ9NVN3 520 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 YJEFN3A6XGL0 299 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 MEI4A8MW99 385 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 E7ENQ6 273 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 PAGE1O75459 146 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 AP2A1O95782 977 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 PROZP22891 400 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 DSG1Q02413 1049 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 SLC34A1Q06495 639 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 SEMA5AQ13591 1074 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 CERCAMQ5T4B2 595 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 POTEHQ6S545 545 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 MON1AQ86VX9 555 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 IFNEQ86WN2 208 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 ACBD6Q9BR61 282 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 HERPUD2Q9BSE4 406 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 LRMDAQ9H2I8 198 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 GID8Q9NWU2 228 aa12.01□□□□□ -0.49
TRA2B-214ENST00000487615 ARL5CA6NH57 179 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 ZBTB24O43167 697 aaPredicted RBP12□□□□□ -0.49
TRA2B-214ENST00000487615 LRIG2O94898 1065 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 SLC18A1P54219 525 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 IL1RL1Q01638 556 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 KPNB1Q14974 876 aaKnown RBP12□□□□□ -0.49
TRA2B-214ENST00000487615 UGT3A1Q6NUS8 523 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 ELMSAN1Q6PJG2 1045 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 ADGRE3Q9BY15 652 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 ATP13A1Q9HD20 1204 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 HMX1Q9NP08 348 aaPredicted RBP12□□□□□ -0.49
TRA2B-214ENST00000487615 DLGAP2Q9P1A6 1054 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 TGDSO95455 350 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 PSEN1P49768 467 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 RPL14P50914 215 aaKnown RBP12□□□□□ -0.49
TRA2B-214ENST00000487615 POU4F1Q01851 419 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 LARP7Q4G0J3 582 aaKnown RBP eCLIP12□□□□□ -0.49
TRA2B-214ENST00000487615 RAP1GAP2Q684P5 730 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 IFNLR1Q8IU57 520 aaPredicted RBP12□□□□□ -0.49
TRA2B-214ENST00000487615 TNS4Q8IZW8 715 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 SERAC1Q96JX3 654 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 CATSPER2Q96P56 530 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 PEBP4Q96S96 227 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 TXLNGYQ9BZA5 131 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 STN1Q9H668 368 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms