RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 MSANTD3Q96H12 275 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 ZNF419Q96HQ0 510 aaPredicted RBP9.79□□□□□ -0.84
MCF2L-227ENST00000486806 LGMNQ99538 433 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 MUC3BQ9H195 1237 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 C8orf33Q9H7E9 229 aaPredicted RBP9.79□□□□□ -0.84
MCF2L-227ENST00000486806 ATP13A1Q9HD20 1204 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 HEBP1Q9NRV9 189 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 HOMER3Q9NSC5 361 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 DEC1Q9P2X7 70 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 IPO11Q9UI26 975 aaKnown RBP9.79□□□□□ -0.84
MCF2L-227ENST00000486806 VPS51Q9UID3 782 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 VPS28Q9UK41 221 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 PIAS3Q9Y6X2 628 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 DOCK4Q8N1I0 1966 aa9.79□□□□□ -0.84
MCF2L-227ENST00000486806 A0A0A0MRY4 1105 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 J3KR12 359 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 KDELR3O43731 214 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 SNAP91O60641 907 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 CD160O95971 181 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 ITGAVP06756 1048 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 CHRM1P11229 460 aaPredicted RBP9.78□□□□□ -0.84
MCF2L-227ENST00000486806 CCNCP24863 283 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 CHRNA3P32297 505 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 GDF10P55107 478 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 IFI35P80217 286 aaPredicted RBP9.78□□□□□ -0.84
MCF2L-227ENST00000486806 KDSRQ06136 332 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 IL10RBQ08334 325 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 EIF4HQ15056 248 aaKnown RBP9.78□□□□□ -0.84
MCF2L-227ENST00000486806 IL31Q6EBC2 164 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 RNF135Q8IUD6 432 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 CCDC13Q8IYE1 715 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 TFB1MQ8WVM0 346 aaKnown RBP9.78□□□□□ -0.84
MCF2L-227ENST00000486806 MAML1Q92585 1016 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 SLCO2A1Q92959 643 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 TTC17Q96AE7 1141 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 ACDQ96AP0 544 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 ZNF599Q96NL3 588 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 PNKPQ96T60 521 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 C2orf49Q9BVC5 232 aaPredicted RBP9.78□□□□□ -0.84
MCF2L-227ENST00000486806 DDX47Q9H0S4 455 aaKnown RBP9.78□□□□□ -0.84
MCF2L-227ENST00000486806 SP110Q9HB58 689 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 USP29Q9HBJ7 922 aa9.78□□□□□ -0.84
MCF2L-227ENST00000486806 MUC22E2RYF6 1773 aaPredicted RBP9.78□□□□□ -0.84
MCF2L-227ENST00000486806 CFAP69A5D8W1 941 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 ZSCAN5CA6NGD5 496 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 PRRT4C9JH25 899 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 H7C0C1 242 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 CBX4O00257 560 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 MATN3O15232 486 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 ZNF189O75820 626 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 KAT7O95251 611 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 RBL1P28749 1068 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 COILP38432 576 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 GRIA2P42262 883 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 CTSOP43234 321 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 ATP5OP48047 213 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 NUMBP49757 651 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 VASPP50552 380 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 CLCN6P51797 869 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 C2orf54Q08AI8 447 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 AP1B1Q10567 949 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 WASHC5Q12768 1159 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 ZBTB17Q13105 803 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 SNX1Q13596 522 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 RFTN1Q14699 578 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 MLF2Q15773 248 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 PTPRNQ16849 979 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 PREPLQ4J6C6 727 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 TMEM196Q5HYL7 178 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 MBLAC2Q68D91 279 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 TIGD7Q6NT04 549 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 CCDC137Q6PK04 289 aaKnown RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 B4GALNT4Q76KP1 1039 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 SFTPA1Q8IWL2 248 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 GJD3Q8N144 294 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 TEX26Q8N6G2 289 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 ALLCQ8N6M5 410 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 CEP112Q8N8E3 955 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 CCNYQ8ND76 341 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 MNS1Q8NEH6 495 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 HTR3CQ8WXA8 447 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 EZH1Q92800 747 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 MAGOHBQ96A72 148 aaKnown RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 MYO19Q96H55 970 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 MRGPRX3Q96LB0 322 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 P2RY13Q9BPV8 354 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 TMEM121Q9BTD3 319 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 SPON2Q9BUD6 331 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 C10orf88Q9H8K7 445 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 FBRSL1Q9HCM7 1045 aaKnown RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 CD320Q9NPF0 282 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 PCYOX1Q9UHG3 505 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 HS3ST2Q9Y278 367 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 DRG1Q9Y295 367 aaKnown RBP9.77□□□□□ -0.85
MCF2L-227ENST00000486806 NEU2Q9Y3R4 380 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 ACTL7AQ9Y615 435 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 TICRRQ7Z2Z1 1910 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 CHD5Q8TDI0 1954 aa9.77□□□□□ -0.85
MCF2L-227ENST00000486806 NYNRINQ9P2P1 1898 aaKnown RBP9.76□□□□□ -0.85
MCF2L-227ENST00000486806 CTAGE15A4D2H0 777 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms