RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 KIF11P52732 1056 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 MLLT10P55197 1068 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 TRIP4Q15650 581 aaPredicted RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 SETMARQ53H47 684 aaPredicted RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 ZNF542PQ5EBM4 170 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 CLEC20AQ6ZU45 233 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 MAMDC2Q7Z304 686 aaPredicted RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 CCDC186Q7Z3E2 898 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 DSG4Q86SJ6 1040 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 TADA2BQ86TJ2 420 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 ACOT1Q86TX2 421 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 STK40Q8N2I9 435 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 GPD1LQ8N335 351 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 KDM1BQ8NB78 822 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.55□□□□□ -1.04
XRN1-212ENST00000486211 ZNF548Q8NEK5 533 aaPredicted RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 FBXO18Q8NFZ0 1043 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 WDR48Q8TAF3 677 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 C9orf43Q8TAL5 461 aaPredicted RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 NOC3LQ8WTT2 800 aaKnown RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 IFT43Q96FT9 208 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 C8orf76Q96K31 380 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 TNIP3Q96KP6 325 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 MYOCQ99972 504 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 GPR27Q9NS67 375 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 CUEDC1Q9NWM3 386 aaPredicted RBP8.55□□□□□ -1.04
XRN1-212ENST00000486211 NCKIPSDQ9NZQ3 722 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 FOXJ2Q9P0K8 574 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 SALL4Q9UJQ4 1053 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 EXOC7Q9UPT5 735 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 KIF3AQ9Y496 699 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 GTF3C3Q9Y5Q9 886 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 USP3Q9Y6I4 520 aa8.55□□□□□ -1.04
XRN1-212ENST00000486211 ITIH6Q6UXX5 1313 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 EDDM13A0A1B0GTR0 161 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 ESPNB1AK53 854 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 MUSKO15146 869 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 SLC7A4O43246 635 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 SLC26A4O43511 780 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 PRKCGP05129 697 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 FAM200BP0CF97 657 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 RALAP11233 206 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 GNLYP22749 145 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 CSKP41240 450 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 MYL6P60660 151 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 SPIDRQ14159 915 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 NR0B2Q15466 257 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 AGBL4Q5VU57 503 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 GCNT7Q6ZNI0 430 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 C12orf29Q8N999 325 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 RNF217Q8TC41 542 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 RAD54LQ92698 747 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 PTPRN2Q92932 1015 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 JAKMIP2Q96AA8 810 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 PLD4Q96BZ4 506 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 TMA16Q96EY4 203 aaKnown RBP8.54□□□□□ -1.04
XRN1-212ENST00000486211 CDK5RAP1Q96SZ6 601 aaKnown RBP8.54□□□□□ -1.04
XRN1-212ENST00000486211 CCDC3Q9BQI4 270 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 BOCQ9BWV1 1114 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 CALN1Q9BXU9 219 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 FGFBP2Q9BYJ0 223 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 EPB41L5Q9HCM4 733 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 PREBQ9HCU5 417 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 PNPLA8Q9NP80 782 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 FAM49BQ9NUQ9 324 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 DNAJC28Q9NX36 388 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 MARCH2Q9P0N8 246 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 PISDQ9UG56 409 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 HMGXB4Q9UGU5 601 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 KLF15Q9UIH9 416 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 CSNK1G3Q9Y6M4 447 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 ADGRG4Q8IZF6 3080 aa8.54□□□□□ -1.04
XRN1-212ENST00000486211 A0A1W2PQ27 194 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 A0A1W2PQ64 194 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 A0A1W2PQC6 194 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 ZNF233A6NK53 670 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 C9orf172C9J069 976 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.53□□□□□ -1.04
XRN1-212ENST00000486211 D6RAR5 112 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 IL1BP01584 269 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 CSF2P04141 144 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 ASLP04424 464 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 NME1P15531 152 aaKnown RBP8.53□□□□□ -1.04
XRN1-212ENST00000486211 PRLRP16471 622 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 ITIH1P19827 911 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 CCKBRP32239 447 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 ETV5P41161 510 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 TAS2R38P59533 333 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 ZNF445P59923 1031 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 ST8SIA6P61647 398 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 HNRNPKP61978 463 aaKnown RBP eCLIP8.53□□□□□ -1.04
XRN1-212ENST00000486211 FZD2Q14332 565 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 ANKRD1Q15327 319 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 SURF1Q15526 300 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 BMT2Q1RMZ1 405 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 DEFB133Q30KQ1 61 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 ABI3BPQ7Z7G0 1075 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 SLC35F3Q8IY50 421 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 CRYBG2Q8N1P7 616 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms