RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 INTS6Q9UL03 887 aaKnown RBP11.66□□□□□ -0.54
NUP50-216ENST00000486184 ERVW-1Q9UQF0 538 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 STARD13Q9Y3M8 1113 aa11.66□□□□□ -0.54
NUP50-216ENST00000486184 ZSCAN5CA6NGD5 496 aaPredicted RBP11.65□□□□□ -0.54
NUP50-216ENST00000486184 C3orf70A6NLC5 250 aaPredicted RBP11.65□□□□□ -0.54
NUP50-216ENST00000486184 USP27XA6NNY8 438 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 PRR33A8MZF0 331 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 ZBTB24O43167 697 aaPredicted RBP11.65□□□□□ -0.54
NUP50-216ENST00000486184 SYNCRIPO60506 623 aaKnown RBP11.65□□□□□ -0.54
NUP50-216ENST00000486184 HNRNPLP14866 589 aaKnown RBP eCLIP11.65□□□□□ -0.54
NUP50-216ENST00000486184 IL4RP24394 825 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 NTSR1P30989 418 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 ACVRL1P37023 503 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 CDKN2BP42772 138 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 KIR2DL1P43626 348 aaPredicted RBP11.65□□□□□ -0.54
NUP50-216ENST00000486184 ZNF234Q14588 700 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 STARD3Q14849 445 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 ACCSLQ4AC99 568 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 HS1BP3Q53T59 392 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 ARTNQ5T4W7 220 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 MEI1Q5TIA1 1274 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 EMC10Q5UCC4 262 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 TMEM215Q68D42 235 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 NCBP2-AS2Q69YL0 99 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 Q6ZS52 159 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 ATPAF2Q8N5M1 289 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 CCDC33Q8N5R6 958 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 TXNDC5Q8NBS9 432 aaKnown RBP11.65□□□□□ -0.54
NUP50-216ENST00000486184 OR52K2Q8NGK3 314 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 PCDH19Q8TAB3 1148 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 NSMCE1Q8WV22 266 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 EZH1Q92800 747 aaPredicted RBP11.65□□□□□ -0.54
NUP50-216ENST00000486184 HMCESQ96FZ2 354 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 MFRPQ9BY79 579 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 CHRDQ9H2X0 955 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 SPATA6Q9NWH7 488 aaPredicted RBP11.65□□□□□ -0.54
NUP50-216ENST00000486184 THAP10Q9P2Z0 257 aaPredicted RBP11.65□□□□□ -0.54
NUP50-216ENST00000486184 VPS51Q9UID3 782 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 JRKLQ9Y4A0 524 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 CKAP5Q14008 2032 aa11.65□□□□□ -0.54
NUP50-216ENST00000486184 hCG_1818297A0A087WSY0 165 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 CHURC1-FNTBB4DL54 471 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 DDX3YO15523 660 aaKnown RBP11.64□□□□□ -0.55
NUP50-216ENST00000486184 PI15O43692 258 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 KDELR3O43731 214 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 MFSD11O43934 449 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 SNAP91O60641 907 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 CST8O60676 142 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 GPR37L1O60883 481 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 EPHX1P07099 455 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 KRT10P13645 584 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 HOXB2P14652 356 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 MX2P20592 715 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 WASP42768 502 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 CTSOP43234 321 aaPredicted RBP11.64□□□□□ -0.55
NUP50-216ENST00000486184 PEX5P50542 639 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 PAPOLAP51003 745 aaKnown RBP11.64□□□□□ -0.55
NUP50-216ENST00000486184 CCR3P51677 355 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 GNG11P61952 73 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 SERINC3Q13530 473 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 PAFAH1B3Q15102 231 aaKnown RBP11.64□□□□□ -0.55
NUP50-216ENST00000486184 PPP2R5EQ16537 467 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 BZW1Q7L1Q6 419 aaKnown RBP11.64□□□□□ -0.55
NUP50-216ENST00000486184 METTL3Q86U44 580 aaKnown RBP11.64□□□□□ -0.55
NUP50-216ENST00000486184 ZNF687Q8N1G0 1237 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 SLC35F6Q8N357 371 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 SPEM1Q8N4L4 309 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 NPWQ8N729 165 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 IL17RCQ8NAC3 791 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 ATP11CQ8NB49 1132 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 ALG3Q92685 438 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 ALG14Q96F25 216 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 RPL10LQ96L21 214 aaKnown RBP11.64□□□□□ -0.55
NUP50-216ENST00000486184 PSMB7Q99436 277 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 SLC39A8Q9C0K1 460 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 LRRC19Q9H756 370 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 POLMQ9NP87 494 aaPredicted RBP11.64□□□□□ -0.55
NUP50-216ENST00000486184 ZDHHC4Q9NPG8 344 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 ETNK2Q9NVF9 386 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 CACNA2D2Q9NY47 1150 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 MMP17Q9ULZ9 603 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 MFHAS1Q9Y4C4 1052 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 HEY1Q9Y5J3 304 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 OR51B4Q9Y5P0 310 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 RAD54BQ9Y620 910 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 STON1Q9Y6Q2 735 aa11.64□□□□□ -0.55
NUP50-216ENST00000486184 ANKRD36A6QL64 1941 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 KCNK3O14649 394 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 PPP1R12AO14974 1030 aaPredicted RBP11.63□□□□□ -0.55
NUP50-216ENST00000486184 LAMTOR5O43504 91 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 NEBLO76041 1014 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 TJP3O95049 919 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 PYGMP11217 842 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 TGM2P21980 687 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 GLDCP23378 1020 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 IL12RB1P42701 662 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 RECQLP46063 649 aaPredicted RBP11.63□□□□□ -0.55
NUP50-216ENST00000486184 STK19P49842 368 aaPredicted RBP11.63□□□□□ -0.55
NUP50-216ENST00000486184 SLC20A2Q08357 652 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 MTAPQ13126 283 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms