RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 A0A0D9SEW6 157 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 A0A1B0GVT2 93 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 ILVBLA1L0T0 632 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 SIGLEC16A6NMB1 481 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 ALOX15BO15296 676 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 SNAP91O60641 907 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 MT-CO1P00395 513 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 SRCP12931 536 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 RFC1P35251 1148 aaPredicted RBP18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 SHC2P98077 582 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 NRG1Q02297 640 aaPredicted RBP18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 C1QBPQ07021 282 aaKnown RBP18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 TEAD4Q15561 434 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 FAM46CQ5VWP2 391 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 WDR59Q6PJI9 974 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 ZNF783Q6ZMS7 281 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 MON1BQ7L1V2 547 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 IRF2BP2Q7Z5L9 587 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 DCAF4L2Q8NA75 395 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 ATP11CQ8NB49 1132 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 PCDH15Q96QU1 1955 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 ORAI3Q9BRQ5 295 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 GAREM1Q9H706 876 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 ZNF212Q9UDV6 495 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 OR12D3Q9UGF7 316 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 VPS51Q9UID3 782 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 PPM1HQ9ULR3 514 aa18.87■□□□□ 0.61
PRPF40A-209ENST00000486100 A0A1W2PPC4 97 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 C10orf142B7Z368 130 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 CER1O95813 267 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 GPD1P21695 349 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 DRD3P35462 400 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 GRIA4P48058 902 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 HNRNPDQ14103 355 aaKnown RBP18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 HLA-BQ31612 363 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 ACAD10Q6JQN1 1059 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 Q6ZVU0 165 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 OR14C36Q8NHC7 312 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 FAM172AQ8WUF8 416 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 BAP1Q92560 729 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 FAM131CQ96AQ9 280 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 FUCA2Q9BTY2 467 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 RETREG1Q9H6L5 497 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 SARDHQ9UL12 918 aa18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 TPX2Q9ULW0 747 aaKnown RBP18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 FARP1Q9Y4F1 1045 aaPredicted RBP18.86■□□□□ 0.61
PRPF40A-209ENST00000486100 TCRBV5S1A1TA0A578 114 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 C1QTNF3-AMACRE9PGA6 284 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 SH3BP5O60239 455 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 ZNF883P0CG24 379 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 TNFAIP3P21580 790 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 CCR5P51681 352 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 CLCN6P51797 869 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 ADPRHP54922 357 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 HDAC4P56524 1084 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 RACK1P63244 317 aaKnown RBP18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 SLC20A2Q08357 652 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 IQCB1Q15051 598 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 KIF19Q2TAC6 998 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 OR7D4Q8NG98 312 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 NAP1L5Q96NT1 182 aaPredicted RBP18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 SPON2Q9BUD6 331 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 KDM4CQ9H3R0 1056 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 EBF2Q9HAK2 575 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 IL21RQ9HBE5 538 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 ANKRD6Q9Y2G4 727 aa18.85■□□□□ 0.61
PRPF40A-209ENST00000486100 TBC1D3DA0A087WVF3 549 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 TBC1D3IA0A087WXS9 549 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 TBC1D3EA0A087X179 549 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 TBC1D3KA0A087X1G2 549 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 A0A1B0GTH6 734 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 A0A1W2PQC6 194 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 TBC1D3FA6NER0 549 aaPredicted RBP18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 TBC1D3LB9A6J9 549 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 K7ERQ8 282 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 SLC7A4O43246 635 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 BNIP3LO60238 219 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 TBC1D3HP0C7X1 549 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 RRM1P23921 792 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 METAP1P53582 386 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 MANEALQ5VSG8 457 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 TBC1D3GQ6DHY5 549 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 TBC1D3CQ6IPX1 549 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 RETSATQ6NUM9 610 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 DNAJC24Q6P3W2 148 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 MCOLN2Q8IZK6 566 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 TBC1D3Q8IZP1 549 aaPredicted RBP18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 OR2A12Q8NGT7 310 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 PIP4K2CQ8TBX8 421 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 NTAN1Q96AB6 310 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 CCDC114Q96M63 670 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 SYT11Q9BT88 431 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 MAGEB5Q9BZ81 275 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 TM7SF3Q9NS93 570 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 SNX11Q9Y5W9 270 aa18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 ASCC3Q8N3C0 2202 aaKnown RBP18.84■□□□□ 0.61
PRPF40A-209ENST00000486100 NUMA1Q14980 2115 aa18.83■□□□□ 0.61
PRPF40A-209ENST00000486100 SPAARA0A1B0GVQ0 90 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 FAM72CH0Y354 149 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms