RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 CKAP4Q07065 602 aaKnown RBP17.5■□□□□ 0.39
VIM-205ENST00000485947 FUT11Q495W5 492 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 DCAF6Q58WW2 860 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 MS4A13Q5J8X5 152 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 TTC39BQ5VTQ0 682 aaPredicted RBP17.5■□□□□ 0.39
VIM-205ENST00000485947 LYSMD4Q5XG99 296 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 IL31Q6EBC2 164 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 KIAA1211LQ6NV74 962 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 SERPINA13PQ6UXR4 307 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 CHST9Q7L1S5 443 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 BNIPLQ7Z465 357 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 CPNE8Q86YQ8 564 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 MFN1Q8IWA4 741 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 KATNAL2Q8IYT4 538 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 FAM172AQ8WUF8 416 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 RLN3Q8WXF3 142 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 KRT35Q92764 455 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 FOXJ1Q92949 421 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 PGAP3Q96FM1 320 aaPredicted RBP17.5■□□□□ 0.39
VIM-205ENST00000485947 NPY6RQ99463 290 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 ITM2CQ9NQX7 267 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 ABCB8Q9NUT2 735 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 MBD1Q9UIS9 605 aaPredicted RBP17.5■□□□□ 0.39
VIM-205ENST00000485947 PLXND1Q9Y4D7 1925 aa17.5■□□□□ 0.39
VIM-205ENST00000485947 IGHV1OR15-9A0A0B4J2B8 117 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 KCNU1A8MYU2 1149 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 F9P00740 461 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 IGLV3-19P01714 112 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 POLR2EP19388 210 aaKnown RBP17.49■□□□□ 0.39
VIM-205ENST00000485947 SLC6A4P31645 630 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 DNA2P51530 1060 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 TAS2R40P59535 323 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 SLC25A11Q02978 314 aaKnown RBP17.49■□□□□ 0.39
VIM-205ENST00000485947 ZBTB16Q05516 673 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 LMAN2Q12907 356 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 CAMK2GQ13555 558 aaPredicted RBP17.49■□□□□ 0.39
VIM-205ENST00000485947 SLC12A1Q13621 1099 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 SF3A2Q15428 464 aaKnown RBP17.49■□□□□ 0.39
VIM-205ENST00000485947 C15orf59Q2T9L4 293 aaPredicted RBP17.49■□□□□ 0.39
VIM-205ENST00000485947 SEL1L2Q5TEA6 688 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 TMEM215Q68D42 235 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 NADSYN1Q6IA69 706 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 RFWD3Q6PCD5 774 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 ADIPOR2Q86V24 386 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 ARFGAP1Q8N6T3 406 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 TTC17Q96AE7 1141 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 TBCBQ99426 244 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 PCED1AQ9H1Q7 454 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 TMEM245Q9H330 911 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 USP36Q9P275 1121 aaKnown RBP17.49■□□□□ 0.39
VIM-205ENST00000485947 SUN2Q9UH99 717 aa17.49■□□□□ 0.39
VIM-205ENST00000485947 WASH3PC4AMC7 463 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 SRGAP2O75044 1071 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 MIPP30301 263 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 RDXP35241 583 aaKnown RBP17.48■□□□□ 0.39
VIM-205ENST00000485947 PAFAH1B1P43034 410 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 ATP11AP98196 1134 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 RPL6Q02878 288 aaKnown RBP17.48■□□□□ 0.39
VIM-205ENST00000485947 CDO1Q16878 200 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 STPG1Q5TH74 334 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 CCDC181Q5TID7 509 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 MBLAC2Q68D91 279 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 TMPRSS6Q8IU80 811 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 RASGEF1CQ8N431 466 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 CEP112Q8N8E3 955 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 CADM4Q8NFZ8 388 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 EXD1Q8NHP7 514 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 TEKT4Q8WW24 435 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 ALG3Q92685 438 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 PRCCQ92733 491 aaPredicted RBP17.48■□□□□ 0.39
VIM-205ENST00000485947 ZNF419Q96HQ0 510 aaPredicted RBP17.48■□□□□ 0.39
VIM-205ENST00000485947 RBM41Q96IZ5 413 aaKnown RBP17.48■□□□□ 0.39
VIM-205ENST00000485947 LMLNQ96KR4 655 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 PSMB7Q99436 277 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 KIAA1522Q9P206 1035 aaPredicted RBP17.48■□□□□ 0.39
VIM-205ENST00000485947 PILRBQ9UKJ0 227 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 TTC7AQ9ULT0 858 aaPredicted RBP17.48■□□□□ 0.39
VIM-205ENST00000485947 RAD54BQ9Y620 910 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 ABCA7Q8IZY2 2146 aa17.48■□□□□ 0.39
VIM-205ENST00000485947 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 GOLGA6L7A0A1B0GV03 622 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 F5H5T6 163 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 TM4SF5O14894 197 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 PRPSAP2O60256 369 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 GDF9O60383 454 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 NDUFS2O75306 463 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 LUC7L3O95232 432 aaKnown RBP17.47■□□□□ 0.39
VIM-205ENST00000485947 EPHX1P07099 455 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 TACR2P21452 398 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 CD6P30203 668 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 CXCR5P32302 372 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 CETN2P41208 172 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 MARCKSL1P49006 195 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 AIF1P55008 147 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 HDAC4P56524 1084 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 ZNF33AQ06730 810 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 CDH18Q13634 790 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 BOLA3Q53S33 107 aa17.47■□□□□ 0.39
VIM-205ENST00000485947 ZC3H12AQ5D1E8 599 aaKnown RBP17.47■□□□□ 0.39
VIM-205ENST00000485947 SYCP2LQ5T4T6 812 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms