RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 ZNF354CQ86Y25 554 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 C4orf33Q8N1A6 199 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 DYDC1Q8WWB3 177 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 ARNTL2Q8WYA1 636 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 MYEOVQ96EZ4 313 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 OXNAD1Q96HP4 312 aaPredicted RBP17.05■□□□□ 0.32
CTSA-207ENST00000484855 FCRL5Q96RD9 977 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 SP110Q9HB58 689 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 RBM22Q9NW64 420 aaKnown RBP eCLIP17.05■□□□□ 0.32
CTSA-207ENST00000484855 BFARQ9NZS9 450 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 CXXC1Q9P0U4 656 aaPredicted RBP17.05■□□□□ 0.32
CTSA-207ENST00000484855 ZNF212Q9UDV6 495 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 AAR2Q9Y312 384 aaKnown RBP17.05■□□□□ 0.32
CTSA-207ENST00000484855 A0A1W2PPM1 405 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 C2orf78A6NCI8 922 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 RAMP2O60895 175 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 SPAG7O75391 227 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 MAPKAPK2P49137 400 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 LRRC14Q15048 493 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 FAM133BQ5BKY9 247 aaKnown RBP17.05■□□□□ 0.32
CTSA-207ENST00000484855 NAPEPLDQ6IQ20 393 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 ITIH5Q86UX2 942 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 KLHDC8BQ8IXV7 354 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 MZB1Q8WU39 189 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 CLP1Q92989 425 aaKnown RBP17.05■□□□□ 0.32
CTSA-207ENST00000484855 PPP1R2P1Q96PQ5 205 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 SMYD2Q9NRG4 433 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 MYLKQ15746 1914 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 FAM47DPA6NHR8 397 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 FAM159BA6NKW6 160 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 PRPF4O43172 522 aaKnown RBP eCLIP17.04■□□□□ 0.324e-7■■■■■ 29.1
CTSA-207ENST00000484855 OAS1P00973 400 aaKnown RBP17.04■□□□□ 0.32
CTSA-207ENST00000484855 CNPP09543 421 aaKnown RBP17.04■□□□□ 0.32
CTSA-207ENST00000484855 SPATA31D3P0C874 917 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 OR1E1P30953 314 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 CORO1AP31146 461 aaKnown RBP17.04■□□□□ 0.32
CTSA-207ENST00000484855 SLC6A4P31645 630 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 GBP2P32456 591 aaPredicted RBP17.04■□□□□ 0.32
CTSA-207ENST00000484855 IFNAR2P48551 515 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 MPP2Q14168 576 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 CRYMQ14894 314 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 POLD3Q15054 466 aaPredicted RBP17.04■□□□□ 0.32
CTSA-207ENST00000484855 RFWD3Q6PCD5 774 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 SPATA31D4Q6ZUB0 917 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 DENND1CQ8IV53 801 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 KLHL23Q8NBE8 558 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 SPATA22Q8NHS9 363 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 APOL2Q9BQE5 337 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 FAM107BQ9H098 131 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 RNF38Q9H0F5 515 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 MLXIPLQ9NP71 852 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 SMG5Q9UPR3 1016 aaKnown RBP17.04■□□□□ 0.32
CTSA-207ENST00000484855 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.04■□□□□ 0.32
CTSA-207ENST00000484855 ANXA9O76027 345 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 STC2O76061 302 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 IRF1P10914 325 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 PARP15Q460N3 678 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 TMEM240Q5SV17 173 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 PSRC1Q6PGN9 363 aaPredicted RBP17.04■□□□□ 0.32
CTSA-207ENST00000484855 LINC00523Q86TU6 105 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 TAX1BP1Q86VP1 789 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 FATE1Q969F0 183 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 CCT8L2Q96SF2 557 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 CCDC134Q9H6E4 229 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 GKN1Q9NS71 199 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 ZNF180Q9UJW8 692 aa17.04■□□□□ 0.32
CTSA-207ENST00000484855 LAMA2P24043 3122 aaKnown RBP17.03■□□□□ 0.32
CTSA-207ENST00000484855 J3KR12 359 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 AP3B1O00203 1094 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 TGM5O43548 720 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 FAM107AO95990 144 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 PEX11BO96011 259 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 MT-CYBP00156 380 aaPredicted RBP17.03■□□□□ 0.32
CTSA-207ENST00000484855 POLBP06746 335 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 KRT4P19013 534 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 RENBPP51606 427 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 GEMP55040 296 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 CDH17Q12864 832 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 HNRNPDQ14103 355 aaKnown RBP17.03■□□□□ 0.32
CTSA-207ENST00000484855 C5orf22Q49AR2 442 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 RABGAP1LQ5R372 815 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 TTC39BQ5VTQ0 682 aaPredicted RBP17.03■□□□□ 0.32
CTSA-207ENST00000484855 CYS1Q717R9 158 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 TMC7Q7Z402 723 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 CFAP52Q8N1V2 620 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 NSMCE1Q8WV22 266 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 PABPC5Q96DU9 382 aaKnown RBP17.03■□□□□ 0.32
CTSA-207ENST00000484855 TBL1YQ9BQ87 522 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 ZNF334Q9HCZ1 680 aaPredicted RBP17.03■□□□□ 0.32
CTSA-207ENST00000484855 MOCS1Q9NZB8 636 aa17.03■□□□□ 0.32
CTSA-207ENST00000484855 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.02■□□□□ 0.32
CTSA-207ENST00000484855 FAM155BO75949 473 aa17.02■□□□□ 0.32
CTSA-207ENST00000484855 ALDH1A2O94788 518 aa17.02■□□□□ 0.32
CTSA-207ENST00000484855 TMEM150AQ86TG1 271 aa17.02■□□□□ 0.32
CTSA-207ENST00000484855 ZNF473Q8WTR7 871 aaKnown RBP17.02■□□□□ 0.32
CTSA-207ENST00000484855 AZIN2Q96A70 460 aa17.02■□□□□ 0.32
CTSA-207ENST00000484855 TTC17Q96AE7 1141 aa17.02■□□□□ 0.32
CTSA-207ENST00000484855 CHMP6Q96FZ7 201 aa17.02■□□□□ 0.32
CTSA-207ENST00000484855 SGSM3Q96HU1 749 aa17.02■□□□□ 0.32
CTSA-207ENST00000484855 KLF16Q9BXK1 252 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms