RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 RAMP2O60895 175 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 LRP3O75074 770 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 RPP40O75818 363 aaKnown RBP14.28□□□□□ -0.12
HDLBP-240ENST00000484412 RHOBTB1O94844 696 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 SRCP12931 536 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 ERCC2P18074 760 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 NDUFV2P19404 249 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 WASP42768 502 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 CTSOP43234 321 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-240ENST00000484412 DPYSQ14117 519 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 SIM2Q14190 667 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-240ENST00000484412 ELAVL3Q14576 367 aaKnown RBP14.28□□□□□ -0.12
HDLBP-240ENST00000484412 POLD3Q15054 466 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-240ENST00000484412 DLG2Q15700 870 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 PLK5Q496M5 336 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 FNDC3BQ53EP0 1204 aaKnown RBP14.28□□□□□ -0.12
HDLBP-240ENST00000484412 TMCO4Q5TGY1 634 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 LAIR1Q6GTX8 287 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 ANO7Q6IWH7 933 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 RWDD4Q6NW29 188 aaKnown RBP14.28□□□□□ -0.12
HDLBP-240ENST00000484412 RAD9BQ6WBX8 426 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 ZNF662Q6ZS27 426 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 RFX8Q6ZV50 586 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 MAP7D3Q8IWC1 876 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 TXLNBQ8N3L3 684 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 GPR161Q8N6U8 529 aaKnown RBP14.28□□□□□ -0.12
HDLBP-240ENST00000484412 TMIEQ8NEW7 156 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 CADM4Q8NFZ8 388 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 PRCCQ92733 491 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-240ENST00000484412 FAF2Q96CS3 445 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 SIPA1Q96FS4 1042 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 ZNF419Q96HQ0 510 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-240ENST00000484412 LRIG1Q96JA1 1093 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 BTBD6Q96KE9 485 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 RPL10LQ96L21 214 aaKnown RBP14.28□□□□□ -0.12
HDLBP-240ENST00000484412 KCTD15Q96SI1 283 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-240ENST00000484412 DUSP15Q9H1R2 295 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-240ENST00000484412 ZDHHC4Q9NPG8 344 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 VPS51Q9UID3 782 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 SLC25A13Q9UJS0 675 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 PCDHGA5Q9Y5G8 931 aa14.28□□□□□ -0.12
HDLBP-240ENST00000484412 EML5Q05BV3 1969 aa14.27□□□□□ -0.12
HDLBP-240ENST00000484412 PRR23AA6NEV1 266 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 DCLK1O15075 740 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 CREB3O43889 395 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 RNASEH1O60930 286 aaKnown RBP14.27□□□□□ -0.13
HDLBP-240ENST00000484412 ZNF821O75541 412 aaPredicted RBP14.27□□□□□ -0.13
HDLBP-240ENST00000484412 IPO7O95373 1038 aaKnown RBP14.27□□□□□ -0.13
HDLBP-240ENST00000484412 RETP07949 1114 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 ARL4AP40617 200 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 DPP6P42658 865 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 TPI1P60174 286 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 RPS14P62263 151 aaKnown RBP14.27□□□□□ -0.13
HDLBP-240ENST00000484412 ARF5P84085 180 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 SERINC3Q13530 473 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 TFAP2DQ7Z6R9 452 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 KBTBD6Q86V97 674 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 OR7D4Q8NG98 312 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 PCDH18Q9HCL0 1135 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 WSB2Q9NYS7 404 aaPredicted RBP14.27□□□□□ -0.13
HDLBP-240ENST00000484412 DNAI1Q9UI46 699 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 PPM1HQ9ULR3 514 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 TPX2Q9ULW0 747 aaKnown RBP14.27□□□□□ -0.13
HDLBP-240ENST00000484412 HPCAL4Q9UM19 191 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 RAD54BQ9Y620 910 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 ALG6Q9Y672 507 aa14.27□□□□□ -0.13
HDLBP-240ENST00000484412 IGHV1OR15-9A0A0B4J2B8 117 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 SOWAHDA6NJG2 315 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 TTC34A8MYJ7 566 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 RASA4BC9J798 803 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 H3BRJ5 948 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 RASA4O43374 803 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 FOXD2O60548 495 aaPredicted RBP14.26□□□□□ -0.13
HDLBP-240ENST00000484412 SIN3BO75182 1162 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 MT-CO1P00395 513 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 HLA-EP13747 358 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 TCF4P15884 667 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 GOT1P17174 413 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 C5AR1P21730 350 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 KDELR1P24390 212 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 CSNK1DP48730 415 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 SERPINH1P50454 418 aaKnown RBP14.26□□□□□ -0.13
HDLBP-240ENST00000484412 VAV2P52735 878 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 NSUN2Q08J23 767 aaKnown RBP eCLIP14.26□□□□□ -0.13
HDLBP-240ENST00000484412 RFTN1Q14699 578 aaPredicted RBP14.26□□□□□ -0.13
HDLBP-240ENST00000484412 KCNT1Q5JUK3 1230 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 PMS2CLQ68D20 193 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 HEATR6Q6AI08 1181 aaKnown RBP14.26□□□□□ -0.13
HDLBP-240ENST00000484412 TXNRD3NBQ6F5E7 133 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 PCDH20Q8N6Y1 951 aaKnown RBP14.26□□□□□ -0.13
HDLBP-240ENST00000484412 HCAR2Q8TDS4 363 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 HMGB4Q8WW32 186 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 FATE1Q969F0 183 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 PHOX2BQ99453 314 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 ZNF670Q9BS34 389 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 KDM4CQ9H3R0 1056 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 GRPEL1Q9HAV7 217 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 ATP13A1Q9HD20 1204 aa14.26□□□□□ -0.13
HDLBP-240ENST00000484412 REXO2Q9Y3B8 237 aaKnown RBP14.26□□□□□ -0.13
HDLBP-240ENST00000484412 MFHAS1Q9Y4C4 1052 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms