RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 CLDN3O15551 220 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PAX4O43316 350 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 MED7O43513 233 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 ACSL4O60488 711 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CCNT1O60563 726 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 CRCPO75575 148 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 KRT36O76013 467 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 TMCC1O94876 653 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 B3GALT4O96024 378 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 AGTP01019 485 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 HLA-DRAP01903 254 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 URODP06132 367 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 RETP07949 1114 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 FHP07954 510 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 MMP2P08253 660 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 SPARCP09486 303 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 ALOX5P09917 674 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 ZCCHC18P0CG32 403 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 ERVK-10P10266 1014 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 KITP10721 976 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PKMP14618 531 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 PDE6AP16499 860 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 GJA1P17302 382 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CDH2P19022 906 aaPredicted RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 SLC9A1P19634 815 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 NR2F2P24468 414 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 EDNRBP24530 442 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CD40P25942 277 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 MAP4P27816 1152 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 TNFRSF8P28908 595 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 RRM2P31350 389 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 TRHRP34981 398 aaPredicted RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 CETN2P41208 172 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 GARSP41250 739 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 PTGER3P43115 390 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CBX5P45973 191 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 HSPA13P48723 471 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 ALDH7A1P49419 539 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 IRAK1P51617 712 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CCR3P51677 355 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 ZNF157P51786 506 aaPredicted RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 METAP1P53582 386 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 NAGLUP54802 743 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 SNU13P55769 128 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 ACTR3P61158 418 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PPARAQ07869 468 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 SF3A3Q12874 501 aaKnown RBP eCLIP3.58□□□□□ -1.84
FXN-204ENST00000484259 FZD5Q13467 585 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 TSTA3Q13630 321 aaPredicted RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 TOB2Q14106 344 aaPredicted RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 PRICKLE4Q2TBC4 344 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PABPC1LQ4VXU2 614 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 HERC4Q5GLZ8 1057 aaPredicted RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 EFHC2Q5JST6 749 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 NOL9Q5SY16 702 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 GRTP1Q5TC63 336 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 MBNL2Q5VZF2 373 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 ANO7Q6IWH7 933 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 HMBOX1Q6NT76 420 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 TMEM53Q6P2H8 277 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 TRIM65Q6PJ69 517 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 DEGS2Q6QHC5 323 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 TPGS1Q6ZTW0 290 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 USP49Q70CQ1 688 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 RNF44Q7L0R7 432 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 ADCK2Q7Z695 626 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 DSG4Q86SJ6 1040 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CAMK1DQ8IU85 385 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 REXO1L1PQ8IX06 675 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 SIRT2Q8IXJ6 389 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CSGALNACT2Q8N6G5 542 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 FAM181AQ8N9Y4 354 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 GLIS1Q8NBF1 620 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 C7orf57Q8NEG2 295 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 AKR7LQ8NHP1 331 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PCDH19Q8TAB3 1148 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 ZCCHC10Q8TBK6 192 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 GPT2Q8TD30 523 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CSGALNACT1Q8TDX6 532 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CCDC12Q8WUD4 166 aaPredicted RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 C7orf43Q8WVR3 580 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 POMGNT1Q8WZA1 660 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 MRPS27Q92552 414 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 RSC1A1Q92681 617 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 SLAMF9Q96A28 289 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 AZIN2Q96A70 460 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 TMEM186Q96B77 213 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 NMD3Q96D46 503 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 C1orf159Q96HA4 380 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 VCPIP1Q96JH7 1222 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 SNX27Q96L92 541 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 SNX22Q96L94 193 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 MYRFLQ96LU7 910 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 ZNF560Q96MR9 790 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PNMA5Q96PV4 448 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 ABHD1Q96SE0 405 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CYTH2Q99418 400 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PKP2Q99959 881 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 SEMA3CQ99985 751 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms