RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CKAP2Q8WWK9 683 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 HMCESQ96FZ2 354 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 ZNF512Q96ME7 567 aaPredicted RBP9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 ZNF778Q96MU6 729 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 FAM161BQ96MY7 647 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 GKN1Q9NS71 199 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 AFF4Q9UHB7 1163 aaKnown RBP9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 TRHDEQ9UKU6 1024 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 PSAT1Q9Y617 370 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 NYNRINQ9P2P1 1898 aaKnown RBP9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 WASH4PA8MWX3 477 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 GRXCR1A8MXD5 290 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 MATN3O15232 486 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 MTSS1O43312 755 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 COCHO43405 550 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 KLKB1P03952 638 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 HLA-DQB2P05538 268 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 VIMP08670 466 aaKnown RBP9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 LINC00271P0C7V0 271 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 SPATA31D3P0C874 917 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 CA4P22748 312 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 SLC6A4P31645 630 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 TUFMP49411 452 aaKnown RBP9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 CRYMQ14894 314 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 STEAP4Q687X5 459 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 FAM109BQ6ICB4 259 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 CDHR3Q6ZTQ4 885 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 EP400NLQ6ZTU2 488 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 SPATA31D4Q6ZUB0 917 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 CPLX4Q7Z7G2 160 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 CFAP52Q8N1V2 620 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 UMODL1-AS1Q8N2C9 162 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 ZNF276Q8N554 614 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 LZTR1Q8N653 840 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 BANPQ8N9N5 519 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 TCP10LQ8TDR4 215 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 WBP2Q969T9 261 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 MFSD3Q96ES6 412 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 TMEM169Q96HH4 297 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 ZNF558Q96NG5 402 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 KLHL5Q96PQ7 755 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 VAT1Q99536 393 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 IL12RB2Q99665 862 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 PAIP2Q9BPZ3 127 aaKnown RBP9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 OXCT2Q9BYC2 517 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 ZYG11BQ9C0D3 744 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 CASS4Q9NQ75 786 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 FGFR1OP2Q9NVK5 253 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 SLC17A7Q9P2U7 560 aa9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 IPO11Q9UI26 975 aaKnown RBP9.02□□□□□ -0.97
CDC42SE1-204ENST00000483763 DOCK4Q8N1I0 1966 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 TTC24A2A3L6 582 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 C2orf78A6NCI8 922 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 TRIM49D1C9J1S8 452 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 EBAG9O00559 213 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 ATP9BO43861 1147 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 TOP3BO95985 862 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 ERVK-10P10266 1014 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 PYGBP11216 843 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 RHOQP17081 205 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 ADRA1DP25100 572 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 HTR7P34969 479 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 ZNF33AQ06730 810 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 SLC10A7Q0GE19 358 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 FAM133BQ5BKY9 247 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 MROH9Q5TGP6 573 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 MICALCLQ6ZW33 695 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 Q7L0L9 218 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 KDELC2Q7Z4H8 507 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 TMEM150AQ86TG1 271 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 OTUD6BQ8N6M0 293 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 DNAAF3Q8N9W5 541 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 OR52K2Q8NGK3 314 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 ATP2A3Q93084 1043 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 PSMG2Q969U7 264 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 SEC16BQ96JE7 1060 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 GDF15Q99988 308 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 IL23AQ9NPF7 189 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 CHRAC1Q9NRG0 131 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 OLA1Q9NTK5 396 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 RBM22Q9NW64 420 aaKnown RBP eCLIP9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 TMEM248Q9NWD8 314 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 NKIRAS1Q9NYS0 192 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 SENP1Q9P0U3 644 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 PPARGC1AQ9UBK2 798 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 ARIH1Q9Y4X5 557 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 IKBKGQ9Y6K9 419 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 RPS6KL1Q9Y6S9 549 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 MYO7AQ13402 2215 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 LTBP2Q14767 1821 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 ZCWPW2A0A1B0GU75 182 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 CCDC78A2IDD5 438 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 DRGXA6NNA5 263 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 SCAMP3O14828 347 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 RFPL1O75677 317 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 GJB3O75712 270 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 TAC1P20366 129 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 SLC18A1P54219 525 aa9.01□□□□□ -0.97
CDC42SE1-204ENST00000483763 MAXP61244 160 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms