RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 MMP8P22894 467 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 OR1E1P30953 314 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 MAT2AP31153 395 aaKnown RBP10.74□□□□□ -0.69
CPSF4-212ENST00000482251 SDC4P31431 198 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 DRD3P35462 400 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 NSFP46459 744 aaKnown RBP10.74□□□□□ -0.69
CPSF4-212ENST00000482251 GRIA4P48058 902 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 PLK1P53350 603 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 OXCT1P55809 520 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 MTA1Q13330 715 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 SMYD5Q6GMV2 418 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 CAVIN1Q6NZI2 390 aaKnown RBP10.74□□□□□ -0.69
CPSF4-212ENST00000482251 LRRC31Q6UY01 552 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 APTXQ7Z2E3 356 aaKnown RBP10.74□□□□□ -0.69
CPSF4-212ENST00000482251 SH2D3CQ8N5H7 860 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 PNPLA1Q8N8W4 532 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 DCAF4L2Q8NA75 395 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 ATP11CQ8NB49 1132 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 OR2T34Q8NGX1 318 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 GRIN3AQ8TCU5 1115 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 TNKS2Q9H2K2 1166 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 AASDHPPTQ9NRN7 309 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 KLK13Q9UKR3 277 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 FZD4Q9ULV1 537 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 ANKRD6Q9Y2G4 727 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 TBC1D30Q9Y2I9 924 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 PCDHB9Q9Y5E1 797 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 ACTL7AQ9Y615 435 aa10.74□□□□□ -0.69
CPSF4-212ENST00000482251 TBC1D3DA0A087WVF3 549 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 TBC1D3IA0A087WXS9 549 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 TBC1D3EA0A087X179 549 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 TBC1D3KA0A087X1G2 549 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 A0A1W2PPC4 97 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 TBC1D3FA6NER0 549 aaPredicted RBP10.73□□□□□ -0.69
CPSF4-212ENST00000482251 GOLGA8CPA6NN73 597 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 TBC1D3LB9A6J9 549 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 C1QTNF3-AMACRE9PGA6 284 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 H0Y8X5 98 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 RNF103O00237 685 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 CBX4O00257 560 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 WNT9AO14904 365 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 SMAD6O43541 496 aaKnown RBP10.73□□□□□ -0.69
CPSF4-212ENST00000482251 KRT37O76014 449 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 CTSLP07711 333 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 TBC1D3HP0C7X1 549 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 UNGP13051 313 aaPredicted RBP10.73□□□□□ -0.69
CPSF4-212ENST00000482251 C21orf59P57076 290 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 KRT83P78385 493 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 CNTN1Q12860 1018 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 PTP4A2Q12974 167 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 SLC14A1Q13336 389 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 TRIP6Q15654 476 aaKnown RBP10.73□□□□□ -0.69
CPSF4-212ENST00000482251 CLEC16AQ2KHT3 1053 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 CCDC14Q49A88 953 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 C5orf22Q49AR2 442 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 PRAMEF14Q5SWL7 426 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 ARTNQ5T4W7 220 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 C6orf118Q5T5N4 469 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 TBC1D3GQ6DHY5 549 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 TBC1D3CQ6IPX1 549 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 RWDD4Q6NW29 188 aaKnown RBP10.73□□□□□ -0.69
CPSF4-212ENST00000482251 C22orf39Q6P5X5 142 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 IL27RAQ6UWB1 636 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 UNQ6494/PRO21346Q6UXR6 183 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 TRIM72Q6ZMU5 477 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 BNIPLQ7Z465 357 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 DSG4Q86SJ6 1040 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 TBC1D3Q8IZP1 549 aaPredicted RBP10.73□□□□□ -0.69
CPSF4-212ENST00000482251 CCDC185Q8N715 623 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 PIP4K2CQ8TBX8 421 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 FAM172AQ8WUF8 416 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 PPP1R9BQ96SB3 815 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 MYOCQ99972 504 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 SPON2Q9BUD6 331 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 C2orf49Q9BVC5 232 aaPredicted RBP10.73□□□□□ -0.69
CPSF4-212ENST00000482251 SELENOOQ9BVL4 669 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 ACE2Q9BYF1 805 aaPredicted RBP10.73□□□□□ -0.69
CPSF4-212ENST00000482251 MAGEB5Q9BZ81 275 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 ZYG11BQ9C0D3 744 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 ATP13A1Q9HD20 1204 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 ADAM22Q9P0K1 906 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 ADAMTS1Q9UHI8 967 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 WASF3Q9UPY6 502 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 BTBD3Q9Y2F9 522 aa10.73□□□□□ -0.69
CPSF4-212ENST00000482251 DOCK4Q8N1I0 1966 aa10.72□□□□□ -0.69
CPSF4-212ENST00000482251 ASPMQ8IZT6 3477 aa10.72□□□□□ -0.69
CPSF4-212ENST00000482251 IGLV3-10A0A075B6K4 115 aa10.72□□□□□ -0.69
CPSF4-212ENST00000482251 C2CD4BA6NLJ0 364 aa10.72□□□□□ -0.69
CPSF4-212ENST00000482251 DRGXA6NNA5 263 aa10.72□□□□□ -0.69
CPSF4-212ENST00000482251 FAM72CH0Y354 149 aa10.72□□□□□ -0.69
CPSF4-212ENST00000482251 KPNA3O00505 521 aaPredicted RBP10.72□□□□□ -0.69
CPSF4-212ENST00000482251 TEX33O43247 280 aa10.72□□□□□ -0.69
CPSF4-212ENST00000482251 ATMINO43313 823 aaPredicted RBP10.72□□□□□ -0.69
CPSF4-212ENST00000482251 WNT1P04628 370 aa10.72□□□□□ -0.69
CPSF4-212ENST00000482251 FTH1P19P0C7X4 201 aa10.72□□□□□ -0.69
CPSF4-212ENST00000482251 CCT8P50990 548 aa10.72□□□□□ -0.69
CPSF4-212ENST00000482251 HDAC4P56524 1084 aa10.72□□□□□ -0.69
CPSF4-212ENST00000482251 RACK1P63244 317 aaKnown RBP10.72□□□□□ -0.69
CPSF4-212ENST00000482251 SFSWAPQ12872 951 aaKnown RBP10.72□□□□□ -0.69
CPSF4-212ENST00000482251 CCDC157Q569K6 752 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms