RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 KRT18P05783 430 aaKnown RBP12.27□□□□□ -0.45
USP11-208ENST00000480104 FAM200BP0CF97 657 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 CCL4P13236 92 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 ADKP55263 362 aaKnown RBP12.27□□□□□ -0.45
USP11-208ENST00000480104 ZNF445P59923 1031 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 C1orf61Q13536 156 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 TESK1Q15569 626 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 TRIP4Q15650 581 aaPredicted RBP12.27□□□□□ -0.45
USP11-208ENST00000480104 KMT5BQ4FZB7 885 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 PRR30Q53SZ7 412 aaPredicted RBP12.27□□□□□ -0.45
USP11-208ENST00000480104 BMP2KLQ5H9B9 411 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 TPRG1LQ5T0D9 272 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 ESRP1Q6NXG1 681 aaKnown RBP12.27□□□□□ -0.45
USP11-208ENST00000480104 CCDC186Q7Z3E2 898 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 HORMAD1Q86X24 394 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 DCP2Q8IU60 420 aaKnown RBP12.27□□□□□ -0.45
USP11-208ENST00000480104 TP53INP2Q8IXH6 220 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 TTC13Q8NBP0 860 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 HVCN1Q96D96 273 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 LURAP1Q96LR2 239 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 C5orf34Q96MH7 638 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 TCEAL2Q9H3H9 227 aaPredicted RBP12.27□□□□□ -0.45
USP11-208ENST00000480104 LRRN3Q9H3W5 708 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 PCIF1Q9H4Z3 704 aa12.27□□□□□ -0.45
USP11-208ENST00000480104 ZNF106Q9H2Y7 1883 aaKnown RBP12.27□□□□□ -0.45
USP11-208ENST00000480104 NYNRINQ9P2P1 1898 aaKnown RBP12.26□□□□□ -0.45
USP11-208ENST00000480104 POM121BA6NF01 834 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 LMO7DNF2Z398 122 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 CAPN5O15484 640 aaPredicted RBP12.26□□□□□ -0.45
USP11-208ENST00000480104 PDGFAP04085 211 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 SRPRAP08240 638 aaKnown RBP12.26□□□□□ -0.45
USP11-208ENST00000480104 GARTP22102 1010 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 ADORA2BP29275 332 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 STK19P49842 368 aaPredicted RBP12.26□□□□□ -0.45
USP11-208ENST00000480104 KIF11P52732 1056 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 C16orf72Q14CZ0 275 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 DCAF6Q58WW2 860 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 PRRT3Q5FWE3 981 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 ADGRF1Q5T601 910 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 RFWD3Q6PCD5 774 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 KYAT3Q6YP21 454 aaKnown RBP12.26□□□□□ -0.45
USP11-208ENST00000480104 SPNS3Q6ZMD2 512 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 SCARA5Q6ZMJ2 495 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 DTHD1Q6ZMT9 781 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 MMS22LQ6ZRQ5 1243 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 CLEC20AQ6ZU45 233 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 ZNF720Q7Z2F6 126 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 MFN1Q8IWA4 741 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 KCTD17Q8N5Z5 321 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 NECAB1Q8N987 351 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 RPL10LQ96L21 214 aaKnown RBP12.26□□□□□ -0.45
USP11-208ENST00000480104 BMFQ96LC9 184 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 SPAG5Q96R06 1193 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 SIRPGQ9P1W8 387 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 SPASTQ9UBP0 616 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 GULP1Q9UBP9 304 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 STOML2Q9UJZ1 356 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 SLC5A6Q9Y289 635 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 UNC13CQ8NB66 2214 aa12.26□□□□□ -0.45
USP11-208ENST00000480104 MAP1AP78559 2803 aaPredicted RBP12.25□□□□□ -0.45
USP11-208ENST00000480104 ANXA6P08133 673 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 EIF2B5Q13144 721 aaKnown RBP12.25□□□□□ -0.45
USP11-208ENST00000480104 PITRM1Q5JRX3 1037 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 PHF19Q5T6S3 580 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 SEL1L3Q68CR1 1132 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 SFR1Q86XK3 245 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 CCNJLQ8IV13 435 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 WDR49Q8IV35 697 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 SLITRK4Q8IW52 837 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 ARL10Q8N8L6 244 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 C12orf29Q8N999 325 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 LRRC61Q9BV99 259 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 STRA6Q9BX79 667 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 XYLT2Q9H1B5 865 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 GPN2Q9H9Y4 310 aaPredicted RBP12.25□□□□□ -0.45
USP11-208ENST00000480104 STIM2Q9P246 746 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 HMGXB4Q9UGU5 601 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 APOBEC3BQ9UH17 382 aaKnown RBP12.25□□□□□ -0.45
USP11-208ENST00000480104 IPO11Q9UI26 975 aaKnown RBP12.25□□□□□ -0.45
USP11-208ENST00000480104 KCND3Q9UK17 655 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 ZFR2Q9UPR6 939 aaKnown RBP12.25□□□□□ -0.45
USP11-208ENST00000480104 EXOC7Q9UPT5 735 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 CEP83Q9Y592 693 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 KCNMB2Q9Y691 235 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 RNF215Q9Y6U7 377 aa12.25□□□□□ -0.45
USP11-208ENST00000480104 DIDO1Q9BTC0 2240 aaKnown RBP12.25□□□□□ -0.45
USP11-208ENST00000480104 YY2O15391 372 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 SPINT1O43278 529 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 RAD1O60671 282 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 SORBS2O94875 1100 aaKnown RBP12.24□□□□□ -0.45
USP11-208ENST00000480104 C4BPAP04003 597 aaKnown RBP12.24□□□□□ -0.45
USP11-208ENST00000480104 CELA2BP08218 269 aaPredicted RBP12.24□□□□□ -0.45
USP11-208ENST00000480104 PRPHP41219 470 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 MYL6P60660 151 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 ECT2LQ008S8 904 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 PDE1CQ14123 709 aaPredicted RBP12.24□□□□□ -0.45
USP11-208ENST00000480104 ARHGAP44Q17R89 818 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 MPP7Q5T2T1 576 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 L1TD1Q5T7N2 865 aaKnown RBP12.24□□□□□ -0.45
USP11-208ENST00000480104 PIP5KL1Q5T9C9 394 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms