RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 SLITRK5O94991 958 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 CYP1A1P04798 512 aaPredicted RBP6.43□□□□□ -1.38
SF3B1-209ENST00000479532 EPHX1P07099 455 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 GLI1P08151 1106 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 MYBL1P10243 752 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 GZMAP12544 262 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 SKILP12757 684 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 HMGA1P17096 107 aaKnown RBP6.43□□□□□ -1.38
SF3B1-209ENST00000479532 CYLC1P35663 651 aaPredicted RBP6.43□□□□□ -1.38
SF3B1-209ENST00000479532 AVPR1AP37288 418 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 TUBP50607 506 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 YWHAGP61981 247 aaKnown RBP eCLIP6.43□□□□□ -1.38
SF3B1-209ENST00000479532 NOMO3P69849 1222 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 NTHL1P78549 312 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 CDK17Q00537 523 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 CDK5R2Q13319 367 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 MAP7Q14244 749 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 SMAD2Q15796 467 aaKnown RBP6.43□□□□□ -1.38
SF3B1-209ENST00000479532 CLEC16AQ2KHT3 1053 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 EFHC1Q5JVL4 640 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 HECTD3Q5T447 861 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 GPR158Q5T848 1215 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 PM20D1Q6GTS8 502 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 OR6B2Q6IFH4 312 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 ACAD10Q6JQN1 1059 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 PMF1Q6P1K2 205 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 TMCO3Q6UWJ1 677 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 MTSS1LQ765P7 747 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 ZNF571Q7Z3V5 609 aaPredicted RBP6.43□□□□□ -1.38
SF3B1-209ENST00000479532 ATG4DQ86TL0 474 aaPredicted RBP6.43□□□□□ -1.38
SF3B1-209ENST00000479532 TMEM110Q86TL2 294 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 CDH24Q86UP0 819 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 DDX42Q86XP3 938 aaKnown RBP eCLIP6.43□□□□□ -1.38
SF3B1-209ENST00000479532 TMC8Q8IU68 726 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 SCAMP5Q8TAC9 235 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.43□□□□□ -1.38
SF3B1-209ENST00000479532 THAP3Q8WTV1 239 aaPredicted RBP6.43□□□□□ -1.38
SF3B1-209ENST00000479532 CPA5Q8WXQ8 436 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 SUSD6Q92537 303 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 E2F7Q96AV8 911 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 FAM149B1Q96BN6 582 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 VCPIP1Q96JH7 1222 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 ZSWIM1Q9BR11 485 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 SELENOOQ9BVL4 669 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 ULBP1Q9BZM6 244 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 MKRN2Q9H000 416 aaKnown RBP6.43□□□□□ -1.38
SF3B1-209ENST00000479532 EPN3Q9H201 632 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 POMKQ9H5K3 350 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 TASP1Q9H6P5 420 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 KIF9Q9HAQ2 790 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 TRPC7Q9HCX4 862 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 ZNF334Q9HCZ1 680 aaPredicted RBP6.43□□□□□ -1.38
SF3B1-209ENST00000479532 ABCC13Q9NSE7 274 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 TMEM30AQ9NV96 361 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 CLIC5Q9NZA1 410 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 GDE1Q9NZC3 331 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 IL37Q9NZH6 218 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 ADAM22Q9P0K1 906 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 CDH7Q9ULB5 785 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 TRANK1O15050 2925 aa6.43□□□□□ -1.38
SF3B1-209ENST00000479532 NUP210Q8TEM1 1887 aaPredicted RBP6.43□□□□□ -1.38
SF3B1-209ENST00000479532 FAM92AA1XBS5 289 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 ZNF840PA6NDX5 716 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 A6NNZ2 444 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 TLR5O60602 858 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 HSF2BPO75031 334 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 LTFP02788 710 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 CKMP06732 381 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 MBL2P11226 248 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 UNGP13051 313 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 RARGP13631 454 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 CEBPBP17676 345 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 CHRNB2P17787 502 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 HDCP19113 662 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 MMP8P22894 467 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 CFPP27918 469 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 ATP5C1P36542 298 aaKnown RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 ETV3P41162 512 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 GABRB2P47870 512 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 RPL34P49207 117 aaKnown RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 KPNA1P52294 538 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 DAOAP59103 153 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 CYP4F8P98187 520 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 SLC6A3Q01959 620 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 TFF2Q03403 129 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 MTA1Q13330 715 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 SQSTM1Q13501 440 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 ZNF268Q14587 947 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 CRYMQ14894 314 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 SPA17Q15506 151 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 TEAD2Q15562 447 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 PDCD2Q16342 344 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 TUBB8Q3ZCM7 444 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 C10orf120Q5SQS8 335 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 CCDC122Q5T0U0 273 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 C10orf76Q5T2E6 689 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 FAM102AQ5T9C2 384 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 SNX30Q5VWJ9 437 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 HEATR6Q6AI08 1181 aaKnown RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 DNAJC24Q6P3W2 148 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms