RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TNFAIP8O95379 198 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 PTPN1P18031 435 aaKnown RBP13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 GLDCP23378 1020 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 SH3BGRP55822 239 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 POU5F1BQ06416 359 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 PPIL2Q13356 520 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 ITGA7Q13683 1181 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 RARS2Q5T160 578 aaKnown RBP13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 PTAR1Q7Z6K3 402 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 ZNF410Q86VK4 478 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 FAM131BQ86XD5 332 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 PPTC7Q8NI37 304 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 ABTB1Q969K4 478 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 RCN3Q96D15 328 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 ZNF696Q9H7X3 374 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 TCF7L2Q9NQB0 619 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 SNX15Q9NRS6 342 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 SYBUQ9NX95 663 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 RAB26Q9ULW5 256 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 ASB14A6NK59 587 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 G3V2L1 256 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 GOT1P17174 413 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 ACAT1P24752 427 aaKnown RBP13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 MPSTP25325 297 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 NRF1Q16656 503 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 PIGGQ5H8A4 983 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 PRAMEF19Q5SWL8 479 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 CDKL3Q8IVW4 592 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 AHI1Q8N157 1196 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 TDRD5Q8NAT2 981 aaKnown RBP13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 ACVR1CQ8NER5 493 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 DMTF1Q9Y222 760 aa13.58□□□□□ -0.24
PDZRN3-208ENST00000479530 JUNP05412 331 aaKnown RBP13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 ENO3P13929 434 aaPredicted RBP13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 CDH2P19022 906 aaPredicted RBP13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 GRM5P41594 1212 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 CYTH1Q15438 398 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 FSCBQ5H9T9 825 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 DCLK2Q8N568 766 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 RIN3Q8TB24 985 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 TBCBQ99426 244 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 DTLQ9NZJ0 730 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 CEPT1Q9Y6K0 416 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 CLDN5O00501 218 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 DPYSL4O14531 572 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 STRNO43815 780 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 FAM58BPP0C7Q3 252 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 TKTP29401 623 aaKnown RBP13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 MAGEA8P43361 318 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 ZBTB6Q15916 424 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 HEATR6Q6AI08 1181 aaKnown RBP13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 KYQ8NBH2 561 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 ZSCAN18Q8TBC5 510 aaPredicted RBP13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 SNRNP27Q8WVK2 155 aaKnown RBP13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 TMEM40Q8WWA1 233 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 CDKL2Q92772 493 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 ZFRQ96KR1 1074 aaKnown RBP13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 FCRL3Q96P31 734 aaPredicted RBP13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 CSPG4P5Q96PW8 444 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 AGAP2Q99490 1192 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 ZNF670Q9BS34 389 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 ADAMTS10Q9H324 1103 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 Q9H521 79 aa13.57□□□□□ -0.24
PDZRN3-208ENST00000479530 TRMUO75648 421 aaKnown RBP13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 RNASEH2AO75792 299 aaKnown RBP13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 BEST1O76090 585 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 PRDX6P30041 224 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 NDUFV1P49821 464 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 ADARP55265 1226 aaKnown RBP13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 SOX4Q06945 474 aaPredicted RBP13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 TMED1Q13445 227 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 PPP2R5DQ14738 602 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 LSM12Q3MHD2 195 aaKnown RBP13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 KLC3Q6P597 504 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 BNC2Q6ZN30 1099 aaPredicted RBP13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 CYS1Q717R9 158 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 CTU1Q7Z7A3 348 aaKnown RBP13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 SLC2A14Q8TDB8 520 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 HSPBAP1Q96EW2 488 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 C11orf84Q9BUA3 381 aaPredicted RBP13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 SEMA6AQ9H2E6 1030 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 MAGED2Q9UNF1 606 aaPredicted RBP13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 AP4E1Q9UPM8 1137 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 CDY2AQ9Y6F7 541 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 CDY1Q9Y6F8 540 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 C7orf72A4D263 438 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 RECQL4O94761 1208 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 MX2P20592 715 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 NUMBP49757 651 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 C9orf57Q5W0N0 161 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 CATSPER4Q7RTX7 472 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 COLGALT1Q8NBJ5 622 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 SNX27Q96L92 541 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 QKIQ96PU8 341 aaKnown RBP eCLIP13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 FERMT1Q9BQL6 677 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 NUF2Q9BZD4 464 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 FAM96AQ9H5X1 160 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 KIAA1257Q9ULG3 409 aa13.56□□□□□ -0.24
PDZRN3-208ENST00000479530 RNF11Q9Y3C5 154 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms