RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 EXOC3L4Q17RC7 722 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 SETMARQ53H47 684 aaPredicted RBP13.35□□□□□ -0.27
ABCF3-212ENST00000478288 NEK5Q6P3R8 708 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 C19orf48Q6RUI8 117 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.35□□□□□ -0.27
ABCF3-212ENST00000478288 KANSL1Q7Z3B3 1105 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 SH2D3CQ8N5H7 860 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 C1orf131Q8NDD1 294 aaKnown RBP13.35□□□□□ -0.27
ABCF3-212ENST00000478288 CRACR2AQ9BSW2 395 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 HS3ST4Q9Y661 456 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 ATMQ13315 3056 aa13.35□□□□□ -0.27
ABCF3-212ENST00000478288 FLNBO75369 2602 aaKnown RBP13.34□□□□□ -0.27
ABCF3-212ENST00000478288 PRAMEF26H0Y7S4 382 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 PRKCSHP14314 528 aaPredicted RBP13.34□□□□□ -0.27
ABCF3-212ENST00000478288 SLC9A1P19634 815 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 CLCN6P51797 869 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 CDH4P55283 916 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 PTK2Q05397 1052 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 CCDC15Q0P6D6 951 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 DLG2Q15700 870 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 BRMS1LQ5PSV4 323 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 PRAMEF14Q5SWL7 426 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 C6orf118Q5T5N4 469 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 FBXL19Q6PCT2 694 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 GJB7Q6PEY0 223 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 FAM183BPQ6ZVS7 135 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 EID2Q8N6I1 236 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 RFFLQ8WZ73 363 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 RNF34Q969K3 372 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 PGAP3Q96FM1 320 aaPredicted RBP13.34□□□□□ -0.27
ABCF3-212ENST00000478288 C2orf49Q9BVC5 232 aaPredicted RBP13.34□□□□□ -0.27
ABCF3-212ENST00000478288 VPS28Q9UK41 221 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 SARDHQ9UL12 918 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 VANGL2Q9ULK5 521 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 PAXBP1Q9Y5B6 917 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 SHROOM3Q8TF72 1996 aa13.34□□□□□ -0.27
ABCF3-212ENST00000478288 RTN2O75298 545 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 PAGE1O75459 146 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 ERBB2P04626 1255 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 CKMT2P17540 419 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 PON1P27169 355 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 SCNN1AP37088 669 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 USP8P40818 1118 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 METAP1P53582 386 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 KRT83P78385 493 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 SLC6A3Q01959 620 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 CNTN1Q12860 1018 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 DNAJC3Q13217 504 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 ARHGAP44Q17R89 818 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 PTPN20Q4JDL3 420 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 SOWAHCQ53LP3 525 aaPredicted RBP13.33□□□□□ -0.28
ABCF3-212ENST00000478288 CCDC157Q569K6 752 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 PIP5KL1Q5T9C9 394 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 OTUD1Q5VV17 481 aaPredicted RBP13.33□□□□□ -0.28
ABCF3-212ENST00000478288 Q6ZVU0 165 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 SETD3Q86TU7 594 aaPredicted RBP13.33□□□□□ -0.28
ABCF3-212ENST00000478288 SPATS2Q86XZ4 545 aaKnown RBP13.33□□□□□ -0.28
ABCF3-212ENST00000478288 MARCH9Q86YJ5 346 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 PASD1Q8IV76 773 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 TMEM145Q8NBT3 493 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 OR52K2Q8NGK3 314 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 PIP4K2CQ8TBX8 421 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 HNRNPLLQ8WVV9 542 aaKnown RBP13.33□□□□□ -0.28
ABCF3-212ENST00000478288 NT5C3BQ969T7 300 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 CCDC114Q96M63 670 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 NPY6RQ99463 290 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 NRSN2Q9GZP1 204 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 ARHGEF38Q9NXL2 777 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 KIAA1468Q9P260 1216 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 STAP1Q9ULZ2 295 aa13.33□□□□□ -0.28
ABCF3-212ENST00000478288 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
ABCF3-212ENST00000478288 SYNJ2BP-COX16A0A087WUM0 186 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 M0QYT0 321 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 PLK4O00444 970 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 GRAP2O75791 330 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 F9P00740 461 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 JUPP14923 745 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 ACP1P24666 158 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 CDH5P33151 784 aaPredicted RBP13.32□□□□□ -0.28
ABCF3-212ENST00000478288 KRT9P35527 623 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 CXCR3P49682 368 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 IRAK1P51617 712 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 TAS2R38P59533 333 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 BPIFB4P59827 614 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 NME3Q13232 169 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 STAT4Q14765 748 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 RTP5Q14D33 572 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 PROX2Q3B8N5 592 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 ACCSLQ4AC99 568 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 IRF2BP1Q8IU81 584 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 ZNF683Q8IZ20 524 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 DCAF4L2Q8NA75 395 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 TMIEQ8NEW7 156 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 FAM174AQ8TBP5 190 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 C1orf74Q96LT6 269 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 SYNCQ9H7C4 482 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 COX16Q9P0S2 106 aa13.32□□□□□ -0.28
ABCF3-212ENST00000478288 IGLV3-10A0A075B6K4 115 aa13.31□□□□□ -0.28
ABCF3-212ENST00000478288 CXorf51AA0A1B0GTR3 108 aa13.31□□□□□ -0.28
ABCF3-212ENST00000478288 CBX4O00257 560 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms