RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 MAGEB18Q96M61 343 aa23.5■■□□□ 1.35
CCDC7-206ENST00000476558 BFARQ9NZS9 450 aa23.5■■□□□ 1.35
CCDC7-206ENST00000476558 MAFFQ9ULX9 164 aa23.5■■□□□ 1.35
CCDC7-206ENST00000476558 HLA-DQB2P05538 268 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 SNRPAP09012 282 aaKnown RBP23.49■■□□□ 1.35
CCDC7-206ENST00000476558 CA4P22748 312 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 TNK2Q07912 1038 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 HNRNPDQ14103 355 aaKnown RBP23.49■■□□□ 1.35
CCDC7-206ENST00000476558 ANO4Q32M45 955 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 FAM133BQ5BKY9 247 aaKnown RBP23.49■■□□□ 1.35
CCDC7-206ENST00000476558 NAPEPLDQ6IQ20 393 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 MARK2Q7KZI7 788 aaKnown RBP23.49■■□□□ 1.35
CCDC7-206ENST00000476558 CPLX4Q7Z7G2 160 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 SPATA22Q8NHS9 363 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 GDAP1Q8TB36 358 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 AUTS2Q8WXX7 1259 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 RPRD1AQ96P16 312 aaPredicted RBP23.49■■□□□ 1.35
CCDC7-206ENST00000476558 YME1L1Q96TA2 773 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 RBM22Q9NW64 420 aaKnown RBP eCLIP23.49■■□□□ 1.35
CCDC7-206ENST00000476558 UBP1Q9NZI7 540 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 TRPM5Q9NZQ8 1165 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 GGA2Q9UJY4 613 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 ANAPC1Q9H1A4 1944 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 HMX2A2RU54 273 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 AP3B1O00203 1094 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 ACSL4O60488 711 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 KRT37O76014 449 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 ANXA9O76027 345 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 POLBP06746 335 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 PPM1AP35813 382 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 SLC1A5Q15758 541 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 SPANXN3Q5MJ09 141 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 OTOP2Q7RTS6 562 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 PIGWQ7Z7B1 504 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 LINC00523Q86TU6 105 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 CHSY1Q86X52 802 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 AZIN2Q96A70 460 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 FCRL3Q96P31 734 aaPredicted RBP23.49■■□□□ 1.35
CCDC7-206ENST00000476558 PPP1R2P1Q96PQ5 205 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 RETREG1Q9H6L5 497 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 RXFP1Q9HBX9 757 aa23.49■■□□□ 1.35
CCDC7-206ENST00000476558 MAGEB16A2A368 324 aa23.48■■□□□ 1.35
CCDC7-206ENST00000476558 ZWINTO95229 277 aa23.48■■□□□ 1.35
CCDC7-206ENST00000476558 DNAJB2P25686 324 aa23.48■■□□□ 1.35
CCDC7-206ENST00000476558 PPP3CCP48454 512 aa23.48■■□□□ 1.35
CCDC7-206ENST00000476558 MAPKAPK2P49137 400 aa23.48■■□□□ 1.35
CCDC7-206ENST00000476558 HTRA4P83105 476 aaPredicted RBP23.48■■□□□ 1.35
CCDC7-206ENST00000476558 NAB1Q13506 487 aa23.48■■□□□ 1.35
CCDC7-206ENST00000476558 LGSNQ5TDP6 509 aa23.48■■□□□ 1.35
CCDC7-206ENST00000476558 DNAAF3Q8N9W5 541 aa23.48■■□□□ 1.35
CCDC7-206ENST00000476558 MRPL17Q9NRX2 175 aaKnown RBP23.48■■□□□ 1.35
CCDC7-206ENST00000476558 CHD5Q8TDI0 1954 aa23.48■■□□□ 1.35
CCDC7-206ENST00000476558 FAM237BA0A1B0GVD1 139 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 TRIM49D1C9J1S8 452 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 J3KR12 359 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 OAS1P00973 400 aaKnown RBP23.47■■□□□ 1.35
CCDC7-206ENST00000476558 SLC6A4P31645 630 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 FOXN2P32314 431 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 ADRA1AP35348 466 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 YBEYP58557 167 aaPredicted RBP23.47■■□□□ 1.35
CCDC7-206ENST00000476558 IL9RQ01113 521 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 CDH17Q12864 832 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 CERCAMQ5T4B2 595 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 TEX26Q8N6G2 289 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 PLD4Q96BZ4 506 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 MTBPQ96DY7 904 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 IL22Q9GZX6 179 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.47■■□□□ 1.35
CCDC7-206ENST00000476558 SAMD15Q9P1V8 674 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 GRID1Q9ULK0 1009 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 RPS6KL1Q9Y6S9 549 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 TCP11X1B4DZS4 312 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 TEX28O15482 410 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 KRT38O76015 456 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 USP1O94782 785 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 MT-CYBP00156 380 aaPredicted RBP23.47■■□□□ 1.35
CCDC7-206ENST00000476558 GBP2P32456 591 aaPredicted RBP23.47■■□□□ 1.35
CCDC7-206ENST00000476558 SERPINB9P50453 376 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 RENBPP51606 427 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 TWF1Q12792 350 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 PARP15Q460N3 678 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 DENND5AQ6IQ26 1287 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 DNAJB7Q7Z6W7 309 aaPredicted RBP23.47■■□□□ 1.35
CCDC7-206ENST00000476558 TMEM150AQ86TG1 271 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 CIR1Q86X95 450 aaPredicted RBP23.47■■□□□ 1.35
CCDC7-206ENST00000476558 SEC16BQ96JE7 1060 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 KLF6Q99612 283 aaPredicted RBP23.47■■□□□ 1.35
CCDC7-206ENST00000476558 APOL2Q9BQE5 337 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 RNF38Q9H0F5 515 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 ZBP1Q9H171 429 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 STK39Q9UEW8 545 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 FAM169AQ9Y6X4 670 aa23.47■■□□□ 1.35
CCDC7-206ENST00000476558 ZCWPW2A0A1B0GU75 182 aa23.46■■□□□ 1.35
CCDC7-206ENST00000476558 F5H5T6 163 aa23.46■■□□□ 1.35
CCDC7-206ENST00000476558 GOLGA8RI6L899 631 aa23.46■■□□□ 1.35
CCDC7-206ENST00000476558 TM9SF1O15321 606 aa23.46■■□□□ 1.35
CCDC7-206ENST00000476558 RFPL1O75677 317 aa23.46■■□□□ 1.35
CCDC7-206ENST00000476558 KLKB1P03952 638 aa23.46■■□□□ 1.35
CCDC7-206ENST00000476558 VIMP08670 466 aaKnown RBP23.46■■□□□ 1.35
CCDC7-206ENST00000476558 TAC1P20366 129 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms