RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 TGM2P21980 687 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 SLC6A4P31645 630 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 TYRO3Q06418 890 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 PITRM1Q5JRX3 1037 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 FAM46CQ5VWP2 391 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 ARHGAP17Q68EM7 881 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 RBM44Q6ZP01 1051 aaKnown RBP14.39□□□□□ -0.11
FAM3A-218ENST00000475657 CCDC117Q8IWD4 279 aaPredicted RBP14.39□□□□□ -0.11
FAM3A-218ENST00000475657 FAM186BQ8IYM0 893 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 SMYD4Q8IYR2 804 aaPredicted RBP14.39□□□□□ -0.11
FAM3A-218ENST00000475657 TTC39CQ8N584 583 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 FAXDC2Q96IV6 333 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 HEXIM2Q96MH2 286 aaKnown RBP14.39□□□□□ -0.11
FAM3A-218ENST00000475657 SPAG5Q96R06 1193 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 DDX50Q9BQ39 737 aaKnown RBP14.39□□□□□ -0.11
FAM3A-218ENST00000475657 FUCA2Q9BTY2 467 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 NIF3L1Q9GZT8 377 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 PREBQ9HCU5 417 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 ABCC13Q9NSE7 274 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 ANO10Q9NW15 660 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 ACSL6Q9UKU0 697 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 TRAF3IP3Q9Y228 551 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 PCDHGA7Q9Y5G6 932 aa14.39□□□□□ -0.11
FAM3A-218ENST00000475657 TYW5A2RUC4 315 aaKnown RBP14.38□□□□□ -0.11
FAM3A-218ENST00000475657 ACSL4O60488 711 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 TNFSF15O95150 251 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 MYF5P13349 255 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 KRT13P13646 458 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 BMP6P22004 513 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 NNMTP40261 264 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 CTSOP43234 321 aaPredicted RBP14.38□□□□□ -0.11
FAM3A-218ENST00000475657 TLE1Q04724 770 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 ADAM9Q13443 819 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 RNF219Q5W0B1 726 aaPredicted RBP14.38□□□□□ -0.11
FAM3A-218ENST00000475657 ZCCHC8Q6NZY4 707 aaKnown RBP14.38□□□□□ -0.11
FAM3A-218ENST00000475657 MSANTD2Q6P1R3 559 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 NEK5Q6P3R8 708 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 DSG4Q86SJ6 1040 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 SCML4Q8N228 414 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 MLKLQ8NB16 471 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 WDR48Q8TAF3 677 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 FAM174AQ8TBP5 190 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 SEMA4DQ92854 862 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 EXTL1Q92935 676 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 STIM2Q9P246 746 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 CSNK1G3Q9Y6M4 447 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 RELNP78509 3460 aa14.38□□□□□ -0.11
FAM3A-218ENST00000475657 CCDC187A0A096LP49 1063 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.37□□□□□ -0.11
FAM3A-218ENST00000475657 GOLGA6L7A0A1B0GV03 622 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 EME2A4GXA9 379 aaPredicted RBP14.37□□□□□ -0.11
FAM3A-218ENST00000475657 YJEFN3A6XGL0 299 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 E7ENQ6 273 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 MSI1O43347 362 aaKnown RBP14.37□□□□□ -0.11
FAM3A-218ENST00000475657 PPFIA2O75334 1257 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 FAM87AP0C7U9 286 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 VASPP50552 380 aaPredicted RBP14.37□□□□□ -0.11
FAM3A-218ENST00000475657 HNRNPKP61978 463 aaKnown RBP eCLIP14.37□□□□□ -0.11
FAM3A-218ENST00000475657 ZNF177Q13360 481 aaPredicted RBP14.37□□□□□ -0.11
FAM3A-218ENST00000475657 STIM1Q13586 685 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 CDH18Q13634 790 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 DPCR1Q3MIW9 517 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 FSCBQ5H9T9 825 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 CT47A1Q5JQC4 288 aaPredicted RBP14.37□□□□□ -0.11
FAM3A-218ENST00000475657 AGBL4Q5VU57 503 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 DCP2Q8IU60 420 aaKnown RBP14.37□□□□□ -0.11
FAM3A-218ENST00000475657 GUF1Q8N442 669 aaKnown RBP14.37□□□□□ -0.11
FAM3A-218ENST00000475657 NDRG1Q92597 394 aaKnown RBP14.37□□□□□ -0.11
FAM3A-218ENST00000475657 EDEM1Q92611 657 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 PRICKLE1Q96MT3 831 aaPredicted RBP14.37□□□□□ -0.11
FAM3A-218ENST00000475657 LRRC4Q9HBW1 653 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 SALL4Q9UJQ4 1053 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 CA5BQ9Y2D0 317 aa14.37□□□□□ -0.11
FAM3A-218ENST00000475657 XPO1O14980 1071 aaKnown RBP14.36□□□□□ -0.11
FAM3A-218ENST00000475657 NOBOXO60393 691 aa14.36□□□□□ -0.11
FAM3A-218ENST00000475657 PSMC2P35998 433 aaKnown RBP14.36□□□□□ -0.11
FAM3A-218ENST00000475657 METAP1P53582 386 aa14.36□□□□□ -0.11
FAM3A-218ENST00000475657 RPS24P62847 133 aaKnown RBP14.36□□□□□ -0.11
FAM3A-218ENST00000475657 ISM2Q6H9L7 571 aa14.36□□□□□ -0.11
FAM3A-218ENST00000475657 MMS22LQ6ZRQ5 1243 aa14.36□□□□□ -0.11
FAM3A-218ENST00000475657 INTS8Q75QN2 995 aaKnown RBP14.36□□□□□ -0.11
FAM3A-218ENST00000475657 ABI3BPQ7Z7G0 1075 aa14.36□□□□□ -0.11
FAM3A-218ENST00000475657 CARNMT1Q8N4J0 409 aa14.36□□□□□ -0.11
FAM3A-218ENST00000475657 SLC4A11Q8NBS3 891 aa14.36□□□□□ -0.11
FAM3A-218ENST00000475657 FRS2Q8WU20 508 aa14.36□□□□□ -0.11
FAM3A-218ENST00000475657 TATDN2Q93075 761 aa14.36□□□□□ -0.11
FAM3A-218ENST00000475657 SRRTQ9BXP5 876 aaKnown RBP14.36□□□□□ -0.11
FAM3A-218ENST00000475657 SLC25A18Q9H1K4 315 aa14.36□□□□□ -0.11
FAM3A-218ENST00000475657 GEMIN8Q9NWZ8 242 aaKnown RBP14.36□□□□□ -0.11
FAM3A-218ENST00000475657 PPM1HQ9ULR3 514 aa14.36□□□□□ -0.11
FAM3A-218ENST00000475657 CEP83Q9Y592 693 aa14.36□□□□□ -0.11
FAM3A-218ENST00000475657 COL27A1Q8IZC6 1860 aaPredicted RBP14.35□□□□□ -0.11
FAM3A-218ENST00000475657 CPED1A4D0V7 1026 aa14.35□□□□□ -0.11
FAM3A-218ENST00000475657 PMS2P1A4D2B8 440 aa14.35□□□□□ -0.11
FAM3A-218ENST00000475657 PSMA7O14818 248 aa14.35□□□□□ -0.11
FAM3A-218ENST00000475657 ALOX15BO15296 676 aa14.35□□□□□ -0.11
FAM3A-218ENST00000475657 SLC31A1O15431 190 aa14.35□□□□□ -0.11
FAM3A-218ENST00000475657 LUC7L3O95232 432 aaKnown RBP14.35□□□□□ -0.11
FAM3A-218ENST00000475657 RPL13P26373 211 aaKnown RBP14.35□□□□□ -0.11
FAM3A-218ENST00000475657 AKT2P31751 481 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms