RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ZDHHC17Q8IUH5 632 aa6.96□□□□□ -1.3
SMC5-203ENST00000475540 FAM217AQ8IXS0 508 aa6.96□□□□□ -1.3
SMC5-203ENST00000475540 CMASQ8NFW8 434 aaPredicted RBP6.96□□□□□ -1.3
SMC5-203ENST00000475540 THAP4Q8WY91 577 aa6.96□□□□□ -1.3
SMC5-203ENST00000475540 NAF1Q96HR8 494 aaKnown RBP6.96□□□□□ -1.3
SMC5-203ENST00000475540 FRMD8Q9BZ67 464 aaPredicted RBP6.96□□□□□ -1.3
SMC5-203ENST00000475540 SIRT3Q9NTG7 399 aaPredicted RBP6.96□□□□□ -1.3
SMC5-203ENST00000475540 THAP1Q9NVV9 213 aa6.96□□□□□ -1.3
SMC5-203ENST00000475540 TRBV5-7A0A0A0MS05 114 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 PROB1E7EW31 1015 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 TCEA3O75764 348 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 ALPLP05186 524 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 FCGR2AP12318 317 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 PNPLA4P41247 253 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 RUNDC3AQ59EK9 446 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 GALNT7Q86SF2 657 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 SPATA5Q8NB90 893 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 C2CD4CQ8TF44 421 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 AFG1LQ8WV93 481 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 INPP5DQ92835 1189 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 KTI12Q96EK9 354 aaPredicted RBP6.95□□□□□ -1.3
SMC5-203ENST00000475540 CHMP4AQ9BY43 222 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 TWSG1Q9GZX9 223 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 RBM38Q9H0Z9 239 aaKnown RBP6.95□□□□□ -1.3
SMC5-203ENST00000475540 PTPRHQ9HD43 1115 aa6.95□□□□□ -1.3
SMC5-203ENST00000475540 RPS10-NUDT3A0A1W2PQS6 291 aa6.94□□□□□ -1.3
SMC5-203ENST00000475540 AVPR2P30518 371 aa6.94□□□□□ -1.3
SMC5-203ENST00000475540 PGGT1BP53609 377 aa6.94□□□□□ -1.3
SMC5-203ENST00000475540 ADCK5Q3MIX3 580 aa6.94□□□□□ -1.3
SMC5-203ENST00000475540 ANKRD45Q5TZF3 282 aa6.94□□□□□ -1.3
SMC5-203ENST00000475540 TMEM268Q5VZI3 342 aa6.94□□□□□ -1.3
SMC5-203ENST00000475540 ANO1Q5XXA6 986 aa6.94□□□□□ -1.3
SMC5-203ENST00000475540 AADACL2Q6P093 401 aa6.94□□□□□ -1.3
SMC5-203ENST00000475540 SLC16A12Q6ZSM3 486 aa6.94□□□□□ -1.3
SMC5-203ENST00000475540 IFT27Q9BW83 186 aa6.94□□□□□ -1.3
SMC5-203ENST00000475540 RMI1Q9H9A7 625 aa6.94□□□□□ -1.3
SMC5-203ENST00000475540 TNNT1P13805 278 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 HOXB2P14652 356 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 TNFSF8P32971 234 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 RASSF2P50749 326 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 THOC5Q13769 683 aaKnown RBP6.93□□□□□ -1.3
SMC5-203ENST00000475540 RAPGEF1Q13905 1077 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 GRAMD1BQ3KR37 738 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 MOGAT3Q86VF5 341 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 PELI3Q8N2H9 469 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 B3GNT4Q9C0J1 378 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 WDR26Q9H7D7 661 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 ACAD9Q9H845 621 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 ZDHHC7Q9NXF8 308 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 DERAQ9Y315 318 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 RAP2CQ9Y3L5 183 aa6.93□□□□□ -1.3
SMC5-203ENST00000475540 FAM90A8PA6NJQ4 464 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 TNFRSF13BO14836 293 aaPredicted RBP6.92□□□□□ -1.3
SMC5-203ENST00000475540 NBNO60934 754 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 TMCC1O94876 653 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 TK1P04183 234 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 FAM90A13PP0C7W8 464 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 FAM90A24PP0C7X0 464 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 DHRS4L1P0CG22 281 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 PRKCHP24723 683 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 CDKN2AP42771 156 aaKnown RBP6.92□□□□□ -1.3
SMC5-203ENST00000475540 ACTR2P61160 394 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 ODF3L2Q3SX64 289 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 ZNF484Q5JVG2 852 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 BRSK2Q8IWQ3 736 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 FTSJ3Q8IY81 847 aaKnown RBP6.92□□□□□ -1.3
SMC5-203ENST00000475540 TMEM57Q8N5G2 664 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 KDM1BQ8NB78 822 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 C7orf57Q8NEG2 295 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 GABPB2Q8TAK5 448 aaPredicted RBP6.92□□□□□ -1.3
SMC5-203ENST00000475540 ASB5Q8WWX0 329 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 LYZL4Q96KX0 146 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 FRG2BQ96QU4 278 aa6.92□□□□□ -1.3
SMC5-203ENST00000475540 SF3B5Q9BWJ5 86 aaKnown RBP6.92□□□□□ -1.3
SMC5-203ENST00000475540 MRPL44Q9H9J2 332 aaKnown RBP6.92□□□□□ -1.3
SMC5-203ENST00000475540 SPTLC2O15270 562 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 IRAK2O43187 625 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 METTL18O95568 372 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 CYP1A2P05177 515 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 CSF1P09603 554 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 ARSAP15289 507 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 SKIV2L2P42285 1042 aaKnown RBP6.91□□□□□ -1.3
SMC5-203ENST00000475540 TAF5Q15542 800 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 LRRC57Q8N9N7 239 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 SPPL3Q8TCT6 385 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 FAR1Q8WVX9 515 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 TRIM63Q969Q1 353 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 TBC1D20Q96BZ9 403 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 RBM17Q96I25 401 aaKnown RBP6.91□□□□□ -1.3
SMC5-203ENST00000475540 ZNF333Q96JL9 665 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 CAMK1GQ96NX5 476 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 PPP1R10Q96QC0 940 aaKnown RBP6.91□□□□□ -1.3
SMC5-203ENST00000475540 WDR77Q9BQA1 342 aaPredicted RBP6.91□□□□□ -1.3
SMC5-203ENST00000475540 HERC2P3Q9BVR0 1158 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 HIF1ANQ9NWT6 349 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 CDH22Q9UJ99 828 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 DHDHQ9UQ10 334 aa6.91□□□□□ -1.3
SMC5-203ENST00000475540 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.9□□□□□ -1.3
SMC5-203ENST00000475540 SAC3D1A6NKF1 404 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 STMND1H3BQB6 276 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms