RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 HMBSP08397 361 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 NUDT17P0C025 328 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 MBL2P11226 248 aaPredicted RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 TSHRP16473 764 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 POU3F3P20264 500 aaPredicted RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 PTPN3P26045 913 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 CD68P34810 354 aaPredicted RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 CHKAP35790 457 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 HSD17B3P37058 310 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 FDFT1P37268 417 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 PAPOLAP51003 745 aaKnown RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 NRLP54845 237 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 CYP4F8P98187 520 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 HNRNPDQ14103 355 aaKnown RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 COL19A1Q14993 1142 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 KCTD19Q17RG1 926 aaPredicted RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 RABGAP1LQ5R372 815 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 PPP2R2DQ66LE6 453 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 KCTD11Q693B1 232 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 TIGD7Q6NT04 549 aaPredicted RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 RWDD4Q6NW29 188 aaKnown RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 LRIG3Q6UXM1 1119 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 TRMT10CQ7L0Y3 403 aaKnown RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 SETD3Q86TU7 594 aaPredicted RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 CHSY1Q86X52 802 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 DENND1CQ8IV53 801 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 CMTM8Q8IZV2 173 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 ZNF567Q8N184 647 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 CNTD1Q8N815 330 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 VN1R2Q8NFZ6 395 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 MAFAQ8NHW3 353 aaPredicted RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 CCDC110Q8TBZ0 833 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 EXOC4Q96A65 974 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 TADA1Q96BN2 335 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 TIFAQ96CG3 184 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 ZNF599Q96NL3 588 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 GUCD1Q96NT3 240 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 GCNAQ96QF7 691 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 CYP2S1Q96SQ9 504 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 GAS2L1Q99501 681 aaPredicted RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 SPSB2Q99619 263 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 SH3GL2Q99962 352 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 FERMT1Q9BQL6 677 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 GORASP1Q9BQQ3 440 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 CORO1BQ9BR76 489 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 TMEM109Q9BVC6 243 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 ACE2Q9BYF1 805 aaPredicted RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 NACA2Q9H009 215 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 MAGEH1Q9H213 219 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 PABPC3Q9H361 631 aaKnown RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 ATXN3LQ9H3M9 355 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 ZNF576Q9H609 170 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 TLE6Q9H808 572 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 SLC28A3Q9HAS3 691 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 PDFQ9HBH1 243 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 ETNK1Q9HBU6 452 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 DZANK1Q9NVP4 752 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 HCFC1R1Q9NWW0 138 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 MPP6Q9NZW5 540 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 IPO11Q9UI26 975 aaKnown RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 HPCAL4Q9UM19 191 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 OR51B4Q9Y5P0 310 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 CPQQ9Y646 472 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 ANAPC1Q9H1A4 1944 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 MTCL1Q9Y4B5 1905 aaKnown RBP6.77□□□□□ -1.33
ATG4A-207ENST00000474825 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.76□□□□□ -1.33
ATG4A-207ENST00000474825 ARHGAP42A6NI28 874 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 ERI2A8K979 691 aaKnown RBP6.76□□□□□ -1.33
ATG4A-207ENST00000474825 RASA4BC9J798 803 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 RNF103O00237 685 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 LEFTY2O00292 366 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 RIPK2O43353 540 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 RASA4O43374 803 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 PRAMEF11O60813 436 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 RAMP2O60895 175 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 TCEA3O75764 348 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 STK10O94804 968 aaKnown RBP6.76□□□□□ -1.33
ATG4A-207ENST00000474825 GLP2RO95838 553 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 ABHD2P08910 425 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 MYL4P12829 197 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 MLNP12872 115 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 FOSL2P15408 326 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 HOXD9P28356 352 aaPredicted RBP6.76□□□□□ -1.33
ATG4A-207ENST00000474825 ACTN2P35609 894 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 VPS41P49754 854 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 PMS2P54278 862 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 DHX9Q08211 1270 aaKnown RBP6.76□□□□□ -1.33
ATG4A-207ENST00000474825 IL10RBQ08334 325 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 AP1B1Q10567 949 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 ZBTB17Q13105 803 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 USP4Q13107 963 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 SERINC3Q13530 473 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 ZNF77Q15935 545 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 SLC5A9Q2M3M2 681 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 GPR158Q5T848 1215 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 TMCO4Q5TGY1 634 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 ANKRD22Q5VYY1 191 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 ARMC3Q5W041 872 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 ALG1LQ6GMV1 187 aa6.76□□□□□ -1.33
ATG4A-207ENST00000474825 CXorf57Q6NSI4 855 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms