RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ACTN3Q08043 901 aaPredicted RBP22.19■■□□□ 1.14
CCM2-206ENST00000474617 PSMD5Q16401 504 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 RASSF3Q86WH2 238 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 CNTD1Q8N815 330 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 GABPB2Q8TAK5 448 aaPredicted RBP22.19■■□□□ 1.14
CCM2-206ENST00000474617 ISL2Q96A47 359 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 AZIN2Q96A70 460 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 KIFC1Q9BW19 673 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 DCDC2Q9UHG0 476 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 IPO11Q9UI26 975 aaKnown RBP22.19■■□□□ 1.14
CCM2-206ENST00000474617 GRID1Q9ULK0 1009 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 USH1CQ9Y6N9 552 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 MICAL3Q7RTP6 2002 aa22.19■■□□□ 1.14
CCM2-206ENST00000474617 PCNTO95613 3336 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 POLD2P49005 469 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 GATMP50440 423 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 DUSP4Q13115 394 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 ZKSCAN8Q15776 578 aaPredicted RBP22.18■■□□□ 1.14
CCM2-206ENST00000474617 C5orf22Q49AR2 442 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 ANKRD20A4Q4UJ75 823 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 PCID2Q5JVF3 399 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 SDHAF4Q5VUM1 108 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 ATG16L1Q676U5 607 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 PDPK2PQ6A1A2 396 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 LCA5Q86VQ0 697 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 ANKLE1Q8NAG6 615 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 IGSF21Q96ID5 467 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 TBL1YQ9BQ87 522 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 PRKD2Q9BZL6 878 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 SLC25A51Q9H1U9 297 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 RXFP1Q9HBX9 757 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 DNMT3LQ9UJW3 386 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 TBX21Q9UL17 535 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 CDY1Q9Y6F8 540 aa22.18■■□□□ 1.14
CCM2-206ENST00000474617 TIMM44O43615 452 aa22.17■■□□□ 1.14
CCM2-206ENST00000474617 GLRA3O75311 464 aa22.17■■□□□ 1.14
CCM2-206ENST00000474617 DCTN3O75935 186 aa22.17■■□□□ 1.14
CCM2-206ENST00000474617 SERPINB4P48594 390 aa22.17■■□□□ 1.14
CCM2-206ENST00000474617 PAPOLAP51003 745 aaKnown RBP22.17■■□□□ 1.14
CCM2-206ENST00000474617 TLE2Q04725 743 aa22.17■■□□□ 1.14
CCM2-206ENST00000474617 KIAA1841Q6NSI8 718 aa22.17■■□□□ 1.14
CCM2-206ENST00000474617 STKLD1Q8NE28 680 aa22.17■■□□□ 1.14
CCM2-206ENST00000474617 SCLYQ96I15 445 aa22.17■■□□□ 1.14
CCM2-206ENST00000474617 RASSF4Q9H2L5 321 aa22.17■■□□□ 1.14
CCM2-206ENST00000474617 HTTP42858 3142 aa22.17■■□□□ 1.14
CCM2-206ENST00000474617 GREB1Q4ZG55 1949 aa22.17■■□□□ 1.14
CCM2-206ENST00000474617 SLC12A8A0AV02 714 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 GOLGA8RI6L899 631 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 TLR5O60602 858 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 VNN2O95498 520 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 SOD2P04179 222 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 DNAJB1P25685 340 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 ATP5C1P36542 298 aaKnown RBP22.16■■□□□ 1.14
CCM2-206ENST00000474617 CCL23P55773 120 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 SETDB1Q15047 1291 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 UGP2Q16851 508 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 TCTN1Q2MV58 587 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 C14orf80Q86SX3 495 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 NETO2Q8NC67 525 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 ZNF669Q96BR6 464 aaPredicted RBP22.16■■□□□ 1.14
CCM2-206ENST00000474617 ZNF599Q96NL3 588 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 RBM22Q9NW64 420 aaKnown RBP eCLIP22.16■■□□□ 1.14
CCM2-206ENST00000474617 SLC17A7Q9P2U7 560 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 SLC27A5Q9Y2P5 690 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 PIAS1O75925 651 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 ITGA2BP08514 1039 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 PAMP19021 973 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 SKIV2L2P42285 1042 aaKnown RBP22.16■■□□□ 1.14
CCM2-206ENST00000474617 CREMQ03060 361 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 CDK18Q07002 472 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 IL10RBQ08334 325 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 LAMB3Q13751 1172 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 BTG3Q14201 252 aaPredicted RBP22.16■■□□□ 1.14
CCM2-206ENST00000474617 TMCO4Q5TGY1 634 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 RSPO2Q6UXX9 243 aaPredicted RBP22.16■■□□□ 1.14
CCM2-206ENST00000474617 NDUFAF2Q8N183 169 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 TEX26Q8N6G2 289 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 TTC9BQ8N6N2 239 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 CCDC63Q8NA47 563 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 PLD4Q96BZ4 506 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 TRMT2BQ96GJ1 504 aaKnown RBP22.16■■□□□ 1.14
CCM2-206ENST00000474617 MYRFLQ96LU7 910 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 FAM111AQ96PZ2 611 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 CWH43Q9H720 699 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 ARNT2Q9HBZ2 717 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 SLC12A4Q9UP95 1085 aa22.16■■□□□ 1.14
CCM2-206ENST00000474617 ZCWPW2A0A1B0GU75 182 aa22.15■■□□□ 1.14
CCM2-206ENST00000474617 DNAJC8O75937 253 aaPredicted RBP22.15■■□□□ 1.14
CCM2-206ENST00000474617 ATP5HO75947 161 aa22.15■■□□□ 1.14
CCM2-206ENST00000474617 NEFHP12036 1026 aa22.15■■□□□ 1.14
CCM2-206ENST00000474617 SLC11A2P49281 568 aa22.15■■□□□ 1.14
CCM2-206ENST00000474617 SERPINB8P50452 374 aa22.15■■□□□ 1.14
CCM2-206ENST00000474617 MROH9Q5TGP6 573 aa22.15■■□□□ 1.14
CCM2-206ENST00000474617 RASIP1Q5U651 963 aa22.15■■□□□ 1.14
CCM2-206ENST00000474617 CCDC91Q7Z6B0 441 aa22.15■■□□□ 1.14
CCM2-206ENST00000474617 PPHLN1Q8NEY8 458 aaKnown RBP22.15■■□□□ 1.14
CCM2-206ENST00000474617 ZNF461Q8TAF7 563 aa22.15■■□□□ 1.14
CCM2-206ENST00000474617 ZNF558Q96NG5 402 aa22.15■■□□□ 1.14
CCM2-206ENST00000474617 KLF6Q99612 283 aaPredicted RBP22.15■■□□□ 1.14
CCM2-206ENST00000474617 RBBP8Q99708 897 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms