RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SDHAF4Q5VUM1 108 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 FYB2Q5VWT5 728 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 DENND5AQ6IQ26 1287 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 RWDD4Q6NW29 188 aaKnown RBP10.01□□□□□ -0.81
USP39-214ENST00000474572 CASC4Q6P4E1 433 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 RSPO2Q6UXX9 243 aaPredicted RBP10.01□□□□□ -0.81
USP39-214ENST00000474572 ASRGL1Q7L266 308 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 RASSF3Q86WH2 238 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 ABI1Q8IZP0 508 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 NDUFAF2Q8N183 169 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 TTC9BQ8N6N2 239 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 ATP6V0D2Q8N8Y2 350 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 ZNF669Q96BR6 464 aaPredicted RBP10.01□□□□□ -0.81
USP39-214ENST00000474572 KIFC1Q9BW19 673 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 TSSK1BQ9BXA7 367 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 IQCGQ9H095 443 aaKnown RBP10.01□□□□□ -0.81
USP39-214ENST00000474572 SIK2Q9H0K1 926 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 CRISPLD1Q9H336 500 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 PCMTD2Q9NV79 361 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 DONSONQ9NYP3 566 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 ZNF212Q9UDV6 495 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 EMCNQ9ULC0 261 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 OGDHLQ9ULD0 1010 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 TET1Q8NFU7 2136 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 MIA3Q5JRA6 1907 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 WDR91A4D1P6 747 aa10□□□□□ -0.81
USP39-214ENST00000474572 DFFAO00273 331 aa10□□□□□ -0.81
USP39-214ENST00000474572 TPP1O14773 563 aa10□□□□□ -0.81
USP39-214ENST00000474572 DNAJC6O75061 913 aa10□□□□□ -0.81
USP39-214ENST00000474572 SNNO75324 88 aaPredicted RBP10□□□□□ -0.81
USP39-214ENST00000474572 ANXA9O76027 345 aa10□□□□□ -0.81
USP39-214ENST00000474572 UNC5CO95185 931 aa10□□□□□ -0.81
USP39-214ENST00000474572 PRKCGP05129 697 aa10□□□□□ -0.81
USP39-214ENST00000474572 HLA-DQB2P05538 268 aa10□□□□□ -0.81
USP39-214ENST00000474572 BGNP21810 368 aa10□□□□□ -0.81
USP39-214ENST00000474572 TUBP50607 506 aa10□□□□□ -0.81
USP39-214ENST00000474572 PAPOLAP51003 745 aaKnown RBP10□□□□□ -0.81
USP39-214ENST00000474572 RPL10AP62906 217 aaKnown RBP10□□□□□ -0.81
USP39-214ENST00000474572 OCRLQ01968 901 aa10□□□□□ -0.81
USP39-214ENST00000474572 C5orf22Q49AR2 442 aa10□□□□□ -0.81
USP39-214ENST00000474572 FAM133BQ5BKY9 247 aaKnown RBP10□□□□□ -0.81
USP39-214ENST00000474572 RTP2Q5QGT7 225 aa10□□□□□ -0.81
USP39-214ENST00000474572 CERCAMQ5T4B2 595 aa10□□□□□ -0.81
USP39-214ENST00000474572 TEDDM1Q5T9Z0 273 aa10□□□□□ -0.81
USP39-214ENST00000474572 SNX30Q5VWJ9 437 aa10□□□□□ -0.81
USP39-214ENST00000474572 FBXW10Q5XX13 1052 aa10□□□□□ -0.81
USP39-214ENST00000474572 FAM91A1Q658Y4 838 aa10□□□□□ -0.81
USP39-214ENST00000474572 ANKS3Q6ZW76 656 aa10□□□□□ -0.81
USP39-214ENST00000474572 NLRP9Q7RTR0 991 aa10□□□□□ -0.81
USP39-214ENST00000474572 ANKRD33Q7Z3H0 272 aa10□□□□□ -0.81
USP39-214ENST00000474572 CNTN4Q8IWV2 1026 aa10□□□□□ -0.81
USP39-214ENST00000474572 LRRC43Q8N309 656 aa10□□□□□ -0.81
USP39-214ENST00000474572 TEX26Q8N6G2 289 aa10□□□□□ -0.81
USP39-214ENST00000474572 ATAD1Q8NBU5 361 aa10□□□□□ -0.81
USP39-214ENST00000474572 ARMC2Q8NEN0 867 aa10□□□□□ -0.81
USP39-214ENST00000474572 BCL7CQ8WUZ0 217 aaPredicted RBP10□□□□□ -0.81
USP39-214ENST00000474572 PTCD2Q8WV60 388 aaKnown RBP10□□□□□ -0.81
USP39-214ENST00000474572 FBXO32Q969P5 355 aa10□□□□□ -0.81
USP39-214ENST00000474572 TADA1Q96BN2 335 aa10□□□□□ -0.81
USP39-214ENST00000474572 BTN2A3PQ96KV6 586 aa10□□□□□ -0.81
USP39-214ENST00000474572 TBL1YQ9BQ87 522 aa10□□□□□ -0.81
USP39-214ENST00000474572 ZYG11BQ9C0D3 744 aa10□□□□□ -0.81
USP39-214ENST00000474572 MYLK2Q9H1R3 596 aa10□□□□□ -0.81
USP39-214ENST00000474572 RETREG1Q9H6L5 497 aa10□□□□□ -0.81
USP39-214ENST00000474572 ECT2Q9H8V3 914 aa10□□□□□ -0.81
USP39-214ENST00000474572 KCNK13Q9HB14 408 aa10□□□□□ -0.81
USP39-214ENST00000474572 ATP13A1Q9HD20 1204 aa10□□□□□ -0.81
USP39-214ENST00000474572 ENTPD7Q9NQZ7 604 aa10□□□□□ -0.81
USP39-214ENST00000474572 ARHGEF3Q9NR81 526 aa10□□□□□ -0.81
USP39-214ENST00000474572 TLR8Q9NR97 1041 aaKnown RBP10□□□□□ -0.81
USP39-214ENST00000474572 PIH1D1Q9NWS0 290 aaKnown RBP10□□□□□ -0.81
USP39-214ENST00000474572 NSMCE4AQ9NXX6 385 aa10□□□□□ -0.81
USP39-214ENST00000474572 ZFATQ9P243 1243 aa10□□□□□ -0.81
USP39-214ENST00000474572 SLC17A6Q9P2U8 582 aa10□□□□□ -0.81
USP39-214ENST00000474572 MTRRQ9UBK8 725 aa10□□□□□ -0.81
USP39-214ENST00000474572 DCDC2Q9UHG0 476 aa10□□□□□ -0.81
USP39-214ENST00000474572 NUDT5Q9UKK9 219 aa10□□□□□ -0.81
USP39-214ENST00000474572 PSAT1Q9Y617 370 aa10□□□□□ -0.81
USP39-214ENST00000474572 KIAA1671Q9BY89 1806 aa10□□□□□ -0.81
USP39-214ENST00000474572 H0YHG0 523 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 PLIN3O60664 434 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 SIN3BO75182 1162 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 ATP5HO75947 161 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 DLDP09622 509 aaKnown RBP9.99□□□□□ -0.81
USP39-214ENST00000474572 ERVK-10P10266 1014 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 CPB1P15086 417 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 ALDH3A1P30838 453 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 SPRP35270 261 aaPredicted RBP9.99□□□□□ -0.81
USP39-214ENST00000474572 VEGFBP49765 207 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 BST1Q10588 318 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 MPP3Q13368 585 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 HNRNPDQ14103 355 aaKnown RBP9.99□□□□□ -0.81
USP39-214ENST00000474572 PDE1CQ14123 709 aaPredicted RBP9.99□□□□□ -0.81
USP39-214ENST00000474572 PCID2Q5JVF3 399 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 RASIP1Q5U651 963 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 CES4AQ5XG92 561 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 ATG16L1Q676U5 607 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 SLC8B1Q6J4K2 584 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 POTEHQ6S545 545 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 KDELC1Q6UW63 502 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms