RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 TMCO2Q7Z6W1 182 aaPredicted RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 HDDC3Q8N4P3 179 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ATG16L2Q8NAA4 619 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ICA1LQ8NDH6 482 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 STKLD1Q8NE28 680 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 OR5M1Q8NGP8 315 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 AKR7LQ8NHP1 331 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 PGM2Q96G03 612 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 CITED4Q96RK1 184 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 RAD9AQ99638 391 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 SLC6A15Q9H2J7 730 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 FAM204AQ9H8W3 233 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 NMRK2Q9NPI5 230 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 GPRC5CQ9NQ84 441 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 AGPAT5Q9NUQ2 364 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 MAP4K5Q9Y4K4 846 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 MINDY4BA8MYZ0 360 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 F8VP50 259 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ACKR2O00590 384 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 SCAMP2O15127 329 aaKnown RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 PGRMC2O15173 223 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 SMAD9O15198 467 aaKnown RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 AKR7A2O43488 359 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 MFN2O95140 757 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 FTCDO95954 541 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 KRT16P08779 473 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 STSP08842 583 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ZCCHC18P0CG32 403 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 TNNI3P19429 210 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 NR2F2P24468 414 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 LCN1P31025 176 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 NT5C2P49902 561 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 RIDAP52758 137 aaKnown RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 SPCS3P61009 180 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 CREB5Q02930 508 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 TLE2Q04725 743 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 DSC1Q08554 894 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 NOGQ13253 232 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 DDX39BQ13838 428 aaKnown RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 FASTKD3Q14CZ7 662 aaKnown RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 SLC5A12Q1EHB4 618 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 DNAL1Q4LDG9 190 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 PRR16Q569H4 304 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 TOR1AIP1Q5JTV8 583 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 FAM171A1Q5VUB5 890 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 C1orf146Q5VVC0 180 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ANO7Q6IWH7 933 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 KIAA1841Q6NSI8 718 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ZNF813Q6ZN06 617 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 Q6ZNX1 250 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 FRMD5Q7Z6J6 570 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 TUSC5Q8IXB3 177 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 DMRTC2Q8IXT2 367 aaPredicted RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 ZNF679Q8IYX0 411 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 GPR150Q8NGU9 434 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ZNF296Q8WUU4 475 aaPredicted RBP3.56□□□□□ -1.84
UBR3-208ENST00000474426 KCTD4Q8WVF5 259 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 OR1E3Q8WZA6 343 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 PTPRN2Q92932 1015 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 RHBDF1Q96CC6 855 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 MAGED4Q96JG8 741 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 NSMCE2Q96MF7 247 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 OSMRQ99650 979 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 HINFPQ9BQA5 517 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 OR51B6Q9H340 312 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 PRDM13Q9H4Q3 707 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 SYTL2Q9HCH5 934 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 CNNM1Q9NRU3 951 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 ETNK2Q9NVF9 386 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 GID8Q9NWU2 228 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 TSPYL4Q9UJ04 414 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 SLC6A14Q9UN76 642 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 CAMK2AQ9UQM7 478 aa3.56□□□□□ -1.84
UBR3-208ENST00000474426 KBTBD13C9JR72 458 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 TBC1D4O60343 1298 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 MAGEC1O60732 1142 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 CD3GP09693 182 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 ITGB6P18564 788 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 CYP2A7P20853 494 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 CHMP24386 653 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 ADRA1DP25100 572 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 PTX3P26022 381 aaPredicted RBP3.55□□□□□ -1.84
UBR3-208ENST00000474426 PPP2R1AP30153 589 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 RGS2P41220 211 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 GPR4P46093 362 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 CCT4P50991 539 aaKnown RBP3.55□□□□□ -1.84
UBR3-208ENST00000474426 CDH6P55285 790 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 MC1RQ01726 317 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 PAK1Q13153 545 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 RCN2Q14257 317 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 CAPRIN1Q14444 709 aaKnown RBP3.55□□□□□ -1.84
UBR3-208ENST00000474426 KRT31Q15323 416 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 LTB4RQ15722 352 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 TBCCQ15814 346 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 TXNRD1Q16881 649 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 ZRANB3Q5FWF4 1079 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 BMP2KLQ5H9B9 411 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 UBE3BQ7Z3V4 1068 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 C2CD5Q86YS7 1000 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 MMAAQ8IVH4 418 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms