RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PSMD3O43242 534 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 GCATO75600 419 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 LAMP2P13473 410 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 TYRP14679 529 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 PSMC3P17980 439 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 SP100P23497 879 aaPredicted RBP10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 TNFRSF8P28908 595 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 NNMTP40261 264 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 MMP13P45452 471 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 IRAK1P51617 712 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 SGSHP51688 502 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 DRG2P55039 364 aaKnown RBP10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 PLTPP55058 493 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 GDF10P55107 478 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 ZXDBP98169 803 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 SULT2A1Q06520 285 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 DLX2Q07687 328 aaPredicted RBP10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 SERINC3Q13530 473 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 RFTN1Q14699 578 aaPredicted RBP10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 ANKRD20A2Q5SQ80 823 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 LY6G5CQ5SRR4 150 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 ANKRD20A1Q5TYW2 823 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 ANKRD20A3Q5VUR7 823 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 DUPD1Q68J44 220 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 MFSD6LQ8IWD5 586 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 ARHGAP12Q8IWW6 846 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 PLCD3Q8N3E9 789 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 TAB3Q8N5C8 712 aaPredicted RBP10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 EIF1ADQ8N9N8 165 aaKnown RBP10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 DCAF4L2Q8NA75 395 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 CCDC110Q8TBZ0 833 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 USP33Q8TEY7 942 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 ARHGEF2Q92974 986 aaKnown RBP10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 HLA-CQ95604 372 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 MSLNLQ96KJ4 702 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 ZNF599Q96NL3 588 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 AGAP3Q96P47 875 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 FMO2Q99518 471 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 CDX2Q99626 313 aaPredicted RBP10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 HINFPQ9BQA5 517 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 KXD1Q9BQD3 176 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 TRMT61BQ9BVS5 477 aaKnown RBP10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 SLC2A11Q9BYW1 496 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 ARFGAP3Q9NP61 516 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 NDFIP2Q9NV92 336 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 TBC1D30Q9Y2I9 924 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 TNRC18O15417 2968 aaPredicted RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 CCDC151A5D8V7 595 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 NRG2O14511 850 aaPredicted RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 KDELR3O43731 214 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 GREM1O60565 184 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 MAFKO60675 156 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 ECI2O75521 394 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 ANXA9O76027 345 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 SEC31AO94979 1220 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 JCHAINP01591 159 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 APRTP07741 180 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 VAV1P15498 845 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 POLR2EP19388 210 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 CA4P22748 312 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 HOXD9P28356 352 aaPredicted RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 RPL22P35268 128 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 HSPA9P38646 679 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 CSKP41240 450 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 RPL21P46778 160 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 DGKGP49619 791 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 ITGA8P53708 1063 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 VSNL1P62760 191 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 IFI35P80217 286 aaPredicted RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 HNRNPDQ14103 355 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 GRM2Q14416 872 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 DMC1Q14565 340 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 LBRQ14739 615 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 NAA30Q147X3 362 aaPredicted RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 MORF4L2Q15014 288 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 E2F5Q15329 346 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 DHCR24Q15392 516 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 PARP6Q2NL67 630 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 PUS10Q3MIT2 529 aaKnown RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 TEX44Q53QW1 395 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 AFMIDQ63HM1 303 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 HOOK3Q86VS8 718 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 CCDC25Q86WR0 208 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 TMEM25Q86YD3 366 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 AHI1Q8N157 1196 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 OR7D4Q8NG98 312 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 FIBINQ8TAL6 211 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 WFIKKN2Q8TEU8 576 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 LRRN4Q8WUT4 740 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 CASKIN2Q8WXE0 1202 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 ACDQ96AP0 544 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 RTP4Q96DX8 246 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 MYADMQ96S97 322 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 PNKPQ96T60 521 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 FSD1LQ9BXM9 530 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 CEP41Q9BYV8 373 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 FRMD8Q9BZ67 464 aaPredicted RBP10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 FOXP3Q9BZS1 431 aa10.48□□□□□ -0.73
PRPF38A-202ENST00000474048 POLR1EQ9GZS1 481 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms