RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SPAG5Q96R06 1193 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 USB1Q9BQ65 265 aaKnown RBP5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 DPH1Q9BZG8 443 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 CAAP1Q9H8G2 361 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 POLR1BQ9H9Y6 1135 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 UPF2Q9HAU5 1272 aaKnown RBP5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 THSD1Q9NS62 852 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 UCKL1Q9NWZ5 548 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 RAB20Q9NX57 234 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 SEPT3Q9UH03 358 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 SERTAD1Q9UHV2 236 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 SLCO3A1Q9UIG8 710 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 PCDHA7Q9UN72 937 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 CA5BQ9Y2D0 317 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 HEMK1Q9Y5R4 338 aaPredicted RBP5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 U3KQA8 63 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 LRBAP50851 2863 aa5.3□□□□□ -1.56
SNRNP40-204ENST00000474025 NBASA2RRP1 2371 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 DOPEY2Q9Y3R5 2298 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 COL27A1Q8IZC6 1860 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 TYW5A2RUC4 315 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 PRAMEF26H0Y7S4 382 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 K7ENP7 123 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 FFAR2O15552 330 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 SLC7A4O43246 635 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 SLC28A2O43868 658 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 CSO75390 466 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 MOCS3O95396 460 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 LTFP02788 710 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 FYNP06241 537 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 GP1BAP07359 652 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 MYF5P13349 255 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 KRT10P13645 584 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 LCP1P13796 627 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 CD19P15391 556 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 CLCN1P35523 988 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 PSMC2P35998 433 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 ME1P48163 572 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 NUMBP49757 651 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 RGS7P49802 495 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 DAB2P98082 770 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 KCNMA1Q12791 1236 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 CNTN1Q12860 1018 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 NNTQ13423 1086 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 CUL2Q13617 745 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 STAT4Q14765 748 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 ZCWPW2Q504Y3 356 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 SETMARQ53H47 684 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 KIAA1614Q5VZ46 1190 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 RNF219Q5W0B1 726 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 PMF1Q6P1K2 205 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 INO80CQ6PI98 192 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 IGF2-ASQ6U949 168 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 ZNF574Q6ZN55 896 aaPredicted RBP5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 TMC6Q7Z403 805 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 APCDD1Q8J025 514 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 CYP4X1Q8N118 509 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 SLC22A18ASQ8N1D0 253 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 UBR7Q8N806 425 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 DQX1Q8TE96 717 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 CLEC4CQ8WTT0 213 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 FRS2Q8WU20 508 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 SLC35F5Q8WV83 523 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 IRGQQ8WZA9 623 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 MED8Q96G25 268 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 SLC39A13Q96H72 371 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 DDX50Q9BQ39 737 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 KLHL11Q9NVR0 708 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 FAM13BQ9NYF5 915 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 HESX1Q9UBX0 185 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 TJP2Q9UDY2 1190 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 IL17BQ9UHF5 180 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 XPO7Q9UIA9 1087 aaKnown RBP5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 SARDHQ9UL12 918 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 CEP83Q9Y592 693 aa5.29□□□□□ -1.56
SNRNP40-204ENST00000474025 DOCK9Q9BZ29 2069 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 CELSR2Q9HCU4 2923 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 PMS2P1A4D2B8 440 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 PIK3R2O00459 728 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 RNGTTO60942 597 aaKnown RBP5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 PIAS2O75928 621 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 RHOBTB3O94955 611 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 MOCS2O96007 188 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 MYL1P05976 194 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 THEGLP0DJG4 465 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 ALPPL2P10696 532 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 VDRP11473 427 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 SFTPCP11686 197 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 PDGFRAP16234 1089 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 PRLRP16471 622 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 RPL13P26373 211 aaKnown RBP5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 SMCPP49901 116 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 INHBCP55103 352 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 TAS2R38P59533 333 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 ADAM9Q13443 819 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 ISXQ2M1V0 245 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 POM121L1PQ3SYA9 428 aa5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 FOXD4L6Q3SYB3 417 aaPredicted RBP5.28□□□□□ -1.56
SNRNP40-204ENST00000474025 CBWD6Q4V339 395 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms