RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SCFD2Q8WU76 684 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 FAM149B1Q96BN6 582 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 GPR78Q96P69 363 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 SERINC2Q96SA4 455 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 IFT27Q9BW83 186 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 HDHD5Q9BXW7 423 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 NUAK2Q9H093 628 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 PRKRIP1Q9H875 184 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-212ENST00000473961 SEMA4BQ9NPR2 832 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-212ENST00000473961 PKP3Q9Y446 797 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 PSAT1Q9Y617 370 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 EMSYQ7Z589 1322 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 C17orf113A0A1B0GUU1 675 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 SYNDIG1LA6NDD5 238 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 LINC00473A8K010 186 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 PLOD3O60568 738 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 HNRNPCL1O60812 293 aaKnown RBP4.56□□□□□ -1.68
BRCA1-212ENST00000473961 ADH4P08319 380 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 C1SP09871 688 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 IRF1P10914 325 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 APEHP13798 732 aaKnown RBP4.56□□□□□ -1.68
BRCA1-212ENST00000473961 AKR1A1P14550 325 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 ARSAP15289 507 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 HOXD13P35453 343 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 PSMB10P40306 273 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 MTNR1AP48039 350 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 BLKP51451 505 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 PRAMEP78395 509 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 MC1RQ01726 317 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 LARS2Q15031 903 aaKnown RBP4.56□□□□□ -1.68
BRCA1-212ENST00000473961 ANXA2RQ3ZCQ2 193 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 CERKLQ49MI3 558 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-212ENST00000473961 LAIR1Q6GTX8 287 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 MTFR2Q6P444 385 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 TMEM81Q6P7N7 255 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 BCDIN3DQ7Z5W3 292 aaKnown RBP4.56□□□□□ -1.68
BRCA1-212ENST00000473961 KLBQ86Z14 1044 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 TAGAPQ8N103 731 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 CPXM2Q8N436 756 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 DNAAF1Q8NEP3 725 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 NEK9Q8TD19 979 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 CREB3L4Q8TEY5 395 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 HSPH1Q92598 858 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 USP6NLQ92738 828 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 KAT2BQ92831 832 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 ZNF764Q96H86 408 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-212ENST00000473961 CCDC34Q96HJ3 373 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 FEM1CQ96JP0 617 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 MPHOSPH8Q99549 860 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.56□□□□□ -1.68
BRCA1-212ENST00000473961 MAK16Q9BXY0 300 aaKnown RBP4.56□□□□□ -1.68
BRCA1-212ENST00000473961 SMYD2Q9NRG4 433 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 SEPT11Q9NVA2 429 aaKnown RBP4.56□□□□□ -1.68
BRCA1-212ENST00000473961 SEMA5BQ9P283 1151 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 TBC1D29Q9UFV1 150 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 FBXO40Q9UH90 709 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 SLC8A2Q9UPR5 921 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 TNFSF13BQ9Y275 285 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 KAT6BQ8WYB5 2073 aa4.56□□□□□ -1.68
BRCA1-212ENST00000473961 OR6C68A6NDL8 312 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 NPIPB15A6NHN6 443 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-212ENST00000473961 EIF3CLB5ME19 914 aaKnown RBP4.55□□□□□ -1.68
BRCA1-212ENST00000473961 PRYO14603 147 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 RNF8O76064 485 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 JTBO76095 146 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 PDE8BO95263 885 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 URODP06132 367 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 LYL1P12980 280 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 ZNF8P17098 575 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-212ENST00000473961 DRD4P21917 467 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 SFPQP23246 707 aaKnown RBP eCLIP4.55□□□□□ -1.68
BRCA1-212ENST00000473961 POU1F1P28069 291 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 FMO4P31512 558 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 KRT20P35900 424 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 CPOXP36551 454 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 PPARGP37231 505 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-212ENST00000473961 YWHAZP63104 245 aaKnown RBP4.55□□□□□ -1.68
BRCA1-212ENST00000473961 SHC2P98077 582 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 HOXA4Q00056 320 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-212ENST00000473961 DMWDQ09019 674 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 ACVR2BQ13705 512 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 FHL2Q14192 279 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 SLC18A3Q16572 532 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 GSTA3Q16772 222 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 AP5B1Q2VPB7 878 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 EDRF1Q3B7T1 1238 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 SH2D4BQ5SQS7 431 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 C10orf76Q5T2E6 689 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 LRCH2Q5VUJ6 765 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 SARM1Q6SZW1 724 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 IL20RBQ6UXL0 311 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 NAPRTQ6XQN6 538 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 IKBIPQ70UQ0 350 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 GALNT5Q7Z7M9 940 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 ULK2Q8IYT8 1036 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 TMTC2Q8N394 836 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 TTC39CQ8N584 583 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 ARHGEF2Q92974 986 aaKnown RBP4.55□□□□□ -1.68
BRCA1-212ENST00000473961 ATP2A3Q93084 1043 aa4.55□□□□□ -1.68
BRCA1-212ENST00000473961 JAKMIP2Q96AA8 810 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms