RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 KLF15Q9UIH9 416 aa12.98□□□□□ -0.33
TRAF4-209ENST00000473421 DMTF1Q9Y222 760 aa12.98□□□□□ -0.33
TRAF4-209ENST00000473421 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
TRAF4-209ENST00000473421 BOD1L1Q8NFC6 3051 aa12.98□□□□□ -0.33
TRAF4-209ENST00000473421 KCNU1A8MYU2 1149 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 PRAMEF26H0Y7S4 382 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 ATP9BO43861 1147 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 SNAP91O60641 907 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 DXOO77932 396 aaKnown RBP12.97□□□□□ -0.33
TRAF4-209ENST00000473421 FBXO21O94952 628 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 ZNF202O95125 648 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 MOCS3O95396 460 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 TRUB2O95900 331 aaKnown RBP12.97□□□□□ -0.33
TRAF4-209ENST00000473421 TGM2P21980 687 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 FMO5P49326 533 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 PLK1P53350 603 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 PCBP4P57723 403 aaKnown RBP12.97□□□□□ -0.33
TRAF4-209ENST00000473421 NNTQ13423 1086 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 FGL2Q14314 439 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 DRAP1Q14919 205 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-209ENST00000473421 ACCSLQ4AC99 568 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 TPRG1LQ5T0D9 272 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 SEL1L3Q68CR1 1132 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 OR6B2Q6IFH4 312 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 GCNT7Q6ZNI0 430 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 PPM1KQ8N3J5 372 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 ZNF557Q8N988 423 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-209ENST00000473421 CHST14Q8NCH0 376 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 OR8D1Q8WZ84 308 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 SNX21Q969T3 373 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 PRR11Q96HE9 360 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-209ENST00000473421 VCPIP1Q96JH7 1222 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 ZNF578Q96N58 590 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-209ENST00000473421 FEM1AQ9BSK4 669 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 CALN1Q9BXU9 219 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 KDM4CQ9H3R0 1056 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 ANLNQ9NQW6 1124 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 KLHL11Q9NVR0 708 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 SNX10Q9Y5X0 201 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 RP1P56715 2156 aa12.97□□□□□ -0.33
TRAF4-209ENST00000473421 SYNJ2BP-COX16A0A087WUM0 186 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 TYW5A2RUC4 315 aaKnown RBP12.96□□□□□ -0.33
TRAF4-209ENST00000473421 B8ZZF3 427 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 E5RJQ4 531 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 I6L893 689 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-209ENST00000473421 K7ESM1 405 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 MCF2LO15068 1137 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 RAD51BO15315 384 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 SLC7A4O43246 635 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 SMAD6O43541 496 aaKnown RBP12.96□□□□□ -0.33
TRAF4-209ENST00000473421 TBXAS1P24557 533 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-209ENST00000473421 LSSP48449 732 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 TMPRSS3P57727 454 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 YWHAEP62258 255 aaKnown RBP12.96□□□□□ -0.33
TRAF4-209ENST00000473421 OVGP1Q12889 678 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 ARTNQ5T4W7 220 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 CRTC1Q6UUV9 634 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 CCDC117Q8IWD4 279 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-209ENST00000473421 CCDC47Q96A33 483 aaKnown RBP12.96□□□□□ -0.33
TRAF4-209ENST00000473421 ATXN7L3BQ96GX2 97 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 BTN2A3PQ96KV6 586 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 BMFQ96LC9 184 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 PSMB7Q99436 277 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 SLC4A5Q9BY07 1137 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 GDPD2Q9HCC8 539 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 COX16Q9P0S2 106 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 SATB2Q9UPW6 733 aa12.96□□□□□ -0.33
TRAF4-209ENST00000473421 POM121BA6NF01 834 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 F5H5T6 163 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 SLC16A3O15427 465 aaKnown RBP12.95□□□□□ -0.34
TRAF4-209ENST00000473421 EFSO43281 561 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 CNTN5O94779 1100 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 APOEP02649 317 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
TRAF4-209ENST00000473421 RHDQ02161 417 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 AUHQ13825 339 aaKnown RBP12.95□□□□□ -0.34
TRAF4-209ENST00000473421 CDKN3Q16667 212 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 ISXQ2M1V0 245 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 SETMARQ53H47 684 aaPredicted RBP12.95□□□□□ -0.34
TRAF4-209ENST00000473421 C3orf38Q5JPI3 329 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 GUSBP11Q6P575 273 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 LINGO4Q6UY18 593 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 WDTC1Q8N5D0 677 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 SH2D3CQ8N5H7 860 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 OR2A12Q8NGT7 310 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 KCNE4Q8WWG9 221 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 NT5C1BQ96P26 610 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 POLR1BQ9H9Y6 1135 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 ARMCX3Q9UH62 379 aaPredicted RBP12.95□□□□□ -0.34
TRAF4-209ENST00000473421 VANGL2Q9ULK5 521 aa12.95□□□□□ -0.34
TRAF4-209ENST00000473421 PNMA8BQ9ULN7 279 aaPredicted RBP12.95□□□□□ -0.34
TRAF4-209ENST00000473421 SPINT1O43278 529 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 GRAP2O75791 330 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 ENDOD1O94919 500 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 SRCP12931 536 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 C6P13671 934 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 ZNF18P17022 549 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 TFE3P19532 575 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-209ENST00000473421 RRM1P23921 792 aa12.94□□□□□ -0.34
TRAF4-209ENST00000473421 NNMTP40261 264 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms