RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 RWDD4Q6NW29 188 aaKnown RBP13.45□□□□□ -0.26
TPM3-216ENST00000473036 CEP68Q76N32 757 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 TRMT11Q7Z4G4 463 aaKnown RBP13.45□□□□□ -0.26
TPM3-216ENST00000473036 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 FAM160A2Q8N612 972 aaPredicted RBP13.45□□□□□ -0.26
TPM3-216ENST00000473036 NETO2Q8NC67 525 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 FRS2Q8WU20 508 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 HMGB4Q8WW32 186 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 CTNNBL1Q8WYA6 563 aaPredicted RBP13.45□□□□□ -0.26
TPM3-216ENST00000473036 TBC1D31Q96DN5 1066 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 DHX35Q9H5Z1 703 aaKnown RBP13.45□□□□□ -0.26
TPM3-216ENST00000473036 PRSS16Q9NQE7 514 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 TMEM248Q9NWD8 314 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 CTTNBP2NLQ9P2B4 639 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 UVRAGQ9P2Y5 699 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 IP6K2Q9UHH9 426 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 DNAI1Q9UI46 699 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 INVSQ9Y283 1065 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 EPN1Q9Y6I3 576 aaPredicted RBP13.45□□□□□ -0.26
TPM3-216ENST00000473036 GON4LQ3T8J9 2241 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 SPEGQ15772 3267 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 EIF3CLB5ME19 914 aaKnown RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 K7ERQ8 282 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 MYO1FO00160 1098 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 RNF103O00237 685 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 AXIN1O15169 862 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 SMAD6O43541 496 aaKnown RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 ZNF821O75541 412 aaPredicted RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 NDUFA10O95299 355 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 CD48P09326 243 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 RARAP10276 462 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 C7P10643 843 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 GOT1P17174 413 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 IL4RP24394 825 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 OR1E1P30953 314 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 MAGEA1P43355 309 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 ARSEP51690 589 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 ARF5P84085 180 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 CAMK2GQ13555 558 aaPredicted RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 SLC12A1Q13621 1099 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 PIGHQ14442 188 aaPredicted RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 ACAP1Q15027 740 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 TCEAL1Q15170 157 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 MAP7D1Q3KQU3 841 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 AASDHQ4L235 1098 aaPredicted RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 FNDC3BQ53EP0 1204 aaKnown RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 C9orf64Q5T6V5 341 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 SERPINA13PQ6UXR4 307 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 SETD3Q86TU7 594 aaPredicted RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 TP53INP2Q8IXH6 220 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 ZNF557Q8N988 423 aaPredicted RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 C12orf50Q8NA57 414 aaPredicted RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 ACRBPQ8NEB7 543 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 UCMAQ8WVF2 138 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 RLN3Q8WXF3 142 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 TSC1Q92574 1164 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 ARHGEF2Q92974 986 aaKnown RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 VOPP1Q96AW1 172 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 MRGPRX1Q96LB2 322 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 EIF3CQ99613 913 aaKnown RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 ACE2Q9BYF1 805 aaPredicted RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 ZWILCHQ9H900 591 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 CWC15Q9P013 229 aaKnown RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 VPS51Q9UID3 782 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 MBD1Q9UIS9 605 aaPredicted RBP13.44□□□□□ -0.26
TPM3-216ENST00000473036 PCDHA13Q9Y5I0 950 aa13.44□□□□□ -0.26
TPM3-216ENST00000473036 CEP192Q8TEP8 1941 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 ILVBLA1L0T0 632 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 WASH4PA8MWX3 477 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 NPC1O15118 1278 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 ARHGAP6O43182 974 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 PRPSAP2O60256 369 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 SIN3BO75182 1162 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 RNF8O76064 485 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 ASLP04424 464 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 ATP5BP06576 529 aaKnown RBP13.43□□□□□ -0.26
TPM3-216ENST00000473036 EPHX1P07099 455 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 SRPRAP08240 638 aaKnown RBP13.43□□□□□ -0.26
TPM3-216ENST00000473036 BCKDHBP21953 392 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 EPHB2P29323 1055 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 KRT83P78385 493 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 GNA12Q03113 381 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 DPYSQ14117 519 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 DPYSL2Q16555 572 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 HNRNPA1L2Q32P51 320 aaKnown RBP13.43□□□□□ -0.26
TPM3-216ENST00000473036 LINGO4Q6UY18 593 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 NPWQ8N729 165 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 RTL3Q8N8U3 475 aaKnown RBP13.43□□□□□ -0.26
TPM3-216ENST00000473036 FAM71BQ8TC56 605 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 GAB3Q8WWW8 586 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 RFFLQ8WZ73 363 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 HSPH1Q92598 858 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 PTPRN2Q92932 1015 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 LACRTQ9GZZ8 138 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 MUC3BQ9H195 1237 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 GOLPH3Q9H4A6 298 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 POLMQ9NP87 494 aaPredicted RBP13.43□□□□□ -0.26
TPM3-216ENST00000473036 ETNK2Q9NVF9 386 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 VPS28Q9UK41 221 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 INTUQ9ULD6 942 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms