RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 PPP1R10Q96QC0 940 aaKnown RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 RANBP9Q96S59 729 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 FIZ1Q96SL8 496 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 OLFM1Q99784 485 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 NEURL2Q9BR09 285 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 GPATCH1Q9BRR8 931 aaKnown RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 RTKNQ9BST9 563 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 STRA6Q9BX79 667 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 GCOM2Q9BZD3 368 aaPredicted RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 TMEM117Q9H0C3 514 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 C12orf65Q9H3J6 166 aaKnown RBP10.31□□□□□ -0.76
APTX-216ENST00000472896 TRPC7Q9HCX4 862 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 HCSTQ9UBK5 93 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 STK39Q9UEW8 545 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 TSC22D4Q9Y3Q8 395 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 NUB1Q9Y5A7 615 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 HEY1Q9Y5J3 304 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 SCINQ9Y6U3 715 aa10.31□□□□□ -0.76
APTX-216ENST00000472896 PROCP04070 461 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 ZSCAN5DPP0CG00 497 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 CIITAP33076 1130 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 STT3AP46977 705 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 NUBP1P53384 320 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 MRPS6P82932 125 aaKnown RBP10.3□□□□□ -0.76
APTX-216ENST00000472896 PPP3CAQ08209 521 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 GRIK4Q16099 956 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 ZBED5Q49AG3 693 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 FSCBQ5H9T9 825 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 RALGPS1Q5JS13 557 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 ANKRD54Q6NXT1 300 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 TRIM72Q6ZMU5 477 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 ERMP1Q7Z2K6 904 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 NANOGNBQ7Z5D8 188 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 AMIGO2Q86SJ2 522 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 SLC26A11Q86WA9 606 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 RHPN2Q8IUC4 686 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 DEFB107AQ8IZN7 70 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 CENPSQ8N2Z9 138 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 ZNF420Q8TAQ5 688 aaPredicted RBP10.3□□□□□ -0.76
APTX-216ENST00000472896 CRYGNQ8WXF5 182 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 PLEKHA8Q96JA3 519 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 DHRS1Q96LJ7 313 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 ZMAT2Q96NC0 199 aaKnown RBP10.3□□□□□ -0.76
APTX-216ENST00000472896 EIF2AK1Q9BQI3 630 aaKnown RBP10.3□□□□□ -0.76
APTX-216ENST00000472896 TRIM56Q9BRZ2 755 aaKnown RBP10.3□□□□□ -0.76
APTX-216ENST00000472896 OSBPL11Q9BXB4 747 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 PNPLA3Q9NST1 481 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 RIMS3Q9UJD0 308 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 PADI3Q9ULW8 664 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 SLC8A2Q9UPR5 921 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 MYRFQ9Y2G1 1151 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 GIT1Q9Y2X7 761 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 COQ4Q9Y3A0 265 aa10.3□□□□□ -0.76
APTX-216ENST00000472896 FAM170AA1A519 330 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 TRIM64CA6NLI5 447 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 H3BNH8 94 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 BPGMP07738 259 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 PTPN2P17706 415 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 PAX3P23760 479 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 ID4P47928 161 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 GPC3P51654 580 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 TAS2R40P59535 323 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 MOGQ16653 247 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 DCLRE1AQ6PJP8 1040 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 C16orf89Q6UX73 402 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 TMEM184AQ6ZMB5 413 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 MIER3Q7Z3K6 550 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 GPR141Q7Z602 305 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 ZBTB33Q86T24 672 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 GPR180Q86V85 440 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 KSR1Q8IVT5 923 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 CHERPQ8IWX8 916 aaKnown RBP10.29□□□□□ -0.76
APTX-216ENST00000472896 PPM1KQ8N3J5 372 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 GLIS1Q8NBF1 620 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 PPP1R14CQ8TAE6 165 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 PIWIL2Q8TC59 973 aaKnown RBP10.29□□□□□ -0.76
APTX-216ENST00000472896 PPP4R1Q8TF05 950 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 STARD8Q92502 1023 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 KAT5Q92993 513 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 NT5C1BQ96P26 610 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 SLITRK1Q96PX8 696 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 HGH1Q9BTY7 390 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 TDRD1Q9BXT4 1180 aaKnown RBP10.29□□□□□ -0.76
APTX-216ENST00000472896 FAM49AQ9H0Q0 323 aaPredicted RBP10.29□□□□□ -0.76
APTX-216ENST00000472896 XAB2Q9HCS7 855 aaKnown RBP10.29□□□□□ -0.76
APTX-216ENST00000472896 SLC38A7Q9NVC3 462 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 ATAD3AQ9NVI7 634 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 GID8Q9NWU2 228 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 DDX56Q9NY93 547 aaKnown RBP10.29□□□□□ -0.76
APTX-216ENST00000472896 IP6K2Q9UHH9 426 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 PTBP2Q9UKA9 531 aaKnown RBP10.29□□□□□ -0.76
APTX-216ENST00000472896 SGK1O00141 431 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 MCF2LO15068 1137 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 MGEA5O60502 916 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 FGF18O76093 207 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 FOSP01100 380 aaPredicted RBP10.29□□□□□ -0.76
APTX-216ENST00000472896 STAG3L1P0CL83 205 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 TCF7P36402 384 aaPredicted RBP10.29□□□□□ -0.76
APTX-216ENST00000472896 GCLMP48507 274 aa10.29□□□□□ -0.76
APTX-216ENST00000472896 IGBP1P78318 339 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms