RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 UPF2Q9HAU5 1272 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 PCDH18Q9HCL0 1135 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 TMEM9BQ9NQ34 198 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 DLL4Q9NR61 685 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 GJB4Q9NTQ9 266 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 TDP1Q9NUW8 608 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 GTSE1Q9NYZ3 720 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 CROTQ9UKG9 612 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 ITGA11Q9UKX5 1188 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 TBX20Q9UMR3 447 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 B3GALT1Q9Y5Z6 326 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 LAMA5O15230 3695 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 SMG1Q96Q15 3661 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 DOCK8Q8NF50 2099 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 KMT2BQ9UMN6 2715 aaPredicted RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 FANCMQ8IYD8 2048 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 FREM2Q5SZK8 3169 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 A0A0B4J269 797 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 VWA3AA6NCI4 1184 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 MROH6A6NGR9 719 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 KPNA7A9QM74 516 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 E9PMD0 336 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 PIRO00625 290 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 CYB561D2O14569 222 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 MOSPD3O75425 235 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 RFPL3O75679 317 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 KCNK5O95279 499 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 PRAMEF12O95522 483 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 CAVIN2O95810 425 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 PLATP00750 562 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 EDN1P05305 212 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 PROS1P07225 676 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 ADRB2P07550 413 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 GAP43P17677 238 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 PDCP20941 246 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 ANXA13P27216 316 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 AOAHP28039 575 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 LONP1P36776 959 aaKnown RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 NOVA1P51513 510 aaKnown RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 ZNF131P52739 623 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 ATXN3P54252 364 aaPredicted RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 SLC12A3P55017 1021 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 MRPS21P82921 87 aaKnown RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 GTF2BQ00403 316 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 GUCY1B3Q02153 619 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 CREB5Q02930 508 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 GOLGA8FQ08AF8 430 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 GOLGA8DPQ0D2H9 430 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 MAPK7Q13164 816 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 STILQ15468 1287 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 SURF1Q15526 300 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 SKIDA1Q1XH10 827 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 PLK5Q496M5 336 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 EOGTQ5NDL2 527 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 CATSPEREQ5SY80 951 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 C9orf57Q5W0N0 161 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 PMS2CLQ68D20 193 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 VSTM1Q6UX27 236 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 UNQ6494/PRO21346Q6UXR6 183 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 Q6ZS52 159 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 GAREM2Q75VX8 874 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 LPCAT2Q7L5N7 544 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 MON1AQ86VX9 555 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 SPATA2LQ8IUW3 424 aaPredicted RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 CCDC83Q8IWF9 413 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 DAW1Q8N136 415 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 HDDC3Q8N4P3 179 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 MYCT1Q8N699 235 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 ATAD1Q8NBU5 361 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 STKLD1Q8NE28 680 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 LARP4BQ92615 738 aaKnown RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 CD101Q93033 1021 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 OTUB2Q96DC9 234 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 SENP8Q96LD8 212 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 CNOT6LQ96LI5 555 aaKnown RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 ACBD6Q9BR61 282 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 REEP2Q9BRK0 252 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 PYM1Q9BRP8 204 aaKnown RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 LRRC27Q9C0I9 530 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 ARRDC1-AS1Q9H2J1 176 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 ECT2Q9H8V3 914 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 SLC39A2Q9NP94 309 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 DUS2Q9NX74 493 aaKnown RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 EVLQ9UI08 416 aaPredicted RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 CPSF3Q9UKF6 684 aaKnown RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 AGO2Q9UKV8 859 aaKnown RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 ARHGAP26Q9UNA1 814 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 MYO10Q9HD67 2058 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 SPEGQ15772 3267 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 WDR81Q562E7 1941 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 MYH15Q9Y2K3 1946 aa3.73□□□□□ -1.81
XRN1-209ENST00000472625 MTCL1Q9Y4B5 1905 aaKnown RBP3.73□□□□□ -1.81
XRN1-209ENST00000472625 ATP8B3O60423 1300 aa3.72□□□□□ -1.81
XRN1-209ENST00000472625 LAMA1P25391 3075 aa3.72□□□□□ -1.81
XRN1-209ENST00000472625 CEP295Q9C0D2 2601 aa3.72□□□□□ -1.81
XRN1-209ENST00000472625 ANO9A1A5B4 782 aa3.72□□□□□ -1.81
XRN1-209ENST00000472625 BCLAF3A2AJT9 711 aaKnown RBP3.72□□□□□ -1.81
XRN1-209ENST00000472625 MYMKA6NI61 221 aa3.72□□□□□ -1.81
XRN1-209ENST00000472625 SHISA7A6NL88 538 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms