RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SLC8A3P57103 927 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 ST8SIA6P61647 398 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 EIF4EBP2Q13542 120 aaPredicted RBP9.62□□□□□ -0.87
VCL-204ENST00000472585 CNGA2Q16280 664 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 POM121L1PQ3SYA9 428 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 CDCP2Q5VXM1 449 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 NAPEPLDQ6IQ20 393 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 CIR1Q86X95 450 aaPredicted RBP9.62□□□□□ -0.87
VCL-204ENST00000472585 UNC45BQ8IWX7 931 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 SIX6OS1Q8N1H7 587 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 TTC39CQ8N584 583 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 MFSD2AQ8NA29 543 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 HJURPQ8NCD3 748 aaPredicted RBP9.62□□□□□ -0.87
VCL-204ENST00000472585 LMO3Q8TAP4 145 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 IRGQQ8WZA9 623 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 KCTD12Q96CX2 325 aaKnown RBP9.62□□□□□ -0.87
VCL-204ENST00000472585 PRMT1Q99873 361 aaKnown RBP9.62□□□□□ -0.87
VCL-204ENST00000472585 IRX2Q9BZI1 471 aaPredicted RBP9.62□□□□□ -0.87
VCL-204ENST00000472585 MIS12Q9H081 205 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 ABCG4Q9H172 646 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 IGSF5Q9NSI5 407 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 ANKMY1Q9P2S6 941 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 HESX1Q9UBX0 185 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 TPX2Q9ULW0 747 aaKnown RBP9.62□□□□□ -0.87
VCL-204ENST00000472585 NOTCH2Q04721 2471 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 DOCK9Q9BZ29 2069 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 TERTO14746 1132 aaKnown RBP9.61□□□□□ -0.87
VCL-204ENST00000472585 PLRG1O43660 514 aaKnown RBP9.61□□□□□ -0.87
VCL-204ENST00000472585 OPA1O60313 960 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 CSO75390 466 aaKnown RBP9.61□□□□□ -0.87
VCL-204ENST00000472585 MOCS2O96007 188 aaPredicted RBP9.61□□□□□ -0.87
VCL-204ENST00000472585 IL1BP01584 269 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 MYL1P05976 194 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 RPL13P26373 211 aaKnown RBP9.61□□□□□ -0.87
VCL-204ENST00000472585 CNTN1Q12860 1018 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 ZNF211Q13398 564 aaPredicted RBP9.61□□□□□ -0.87
VCL-204ENST00000472585 TAF5Q15542 800 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 EDRF1Q3B7T1 1238 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 ZSCAN23Q3MJ62 389 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 ZC3H12AQ5D1E8 599 aaKnown RBP9.61□□□□□ -0.87
VCL-204ENST00000472585 AGBL4Q5VU57 503 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 RAP1GAP2Q684P5 730 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 NUGGCQ68CJ6 796 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 XKR5Q6UX68 686 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 KRBA2Q6ZNG9 492 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 TMC6Q7Z403 805 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 TAC4Q86UU9 113 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 LGI2Q8N0V4 545 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 TMEM145Q8NBT3 493 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 KLK6Q92876 244 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 SLC35C1Q96A29 364 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 NOX5Q96PH1 765 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 EVA1BQ9NVM1 165 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 USP25Q9UHP3 1055 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 PPM1HQ9ULR3 514 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 TLR6Q9Y2C9 796 aa9.61□□□□□ -0.87
VCL-204ENST00000472585 TEP1Q99973 2627 aaKnown RBP9.6□□□□□ -0.87
VCL-204ENST00000472585 PMS2P1A4D2B8 440 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 ADH1BP00325 375 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 IGLV3-25P01717 112 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 CTSLP07711 333 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 GP1BBP13224 206 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 PDGFRAP16234 1089 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 TACR2P21452 398 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 DGKAP23743 735 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 PRCPP42785 496 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 GPD2P43304 727 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 SYKP43405 635 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 CDH18Q13634 790 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 C3orf38Q5JPI3 329 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 ANKRD40Q6AI12 368 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 ATL3Q6DD88 541 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 CXorf57Q6NSI4 855 aaKnown RBP9.6□□□□□ -0.87
VCL-204ENST00000472585 TMEM270Q6UE05 265 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 PRPF39Q86UA1 669 aaKnown RBP9.6□□□□□ -0.87
VCL-204ENST00000472585 HSFY1Q96LI6 401 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 MYOCQ99972 504 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 DNAI2Q9GZS0 605 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 OSBPL2Q9H1P3 480 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 ASCL3Q9NQ33 180 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 TJP2Q9UDY2 1190 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 CFAP45Q9UL16 551 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 KIAA1257Q9ULG3 409 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 OR51B4Q9Y5P0 310 aa9.6□□□□□ -0.87
VCL-204ENST00000472585 CREBBPQ92793 2442 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 A0A1B0GVM2 712 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 TRIM49BA6NDI0 452 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 KCNU1A8MYU2 1149 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 M0QYV0 167 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 CETN3O15182 167 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 SLC31A1O15431 190 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 ATP9BO43861 1147 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 MT-CO1P00395 513 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 AFPP02771 609 aaKnown RBP9.59□□□□□ -0.87
VCL-204ENST00000472585 PAEPP09466 180 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 ALPPL2P10696 532 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 EPB41P11171 864 aaKnown RBP9.59□□□□□ -0.87
VCL-204ENST00000472585 SFTPCP11686 197 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 PRLRP16471 622 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 DUSP3P51452 185 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms