RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SLC39A13Q96H72 371 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 GABRG3Q99928 467 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 PACSIN1Q9BY11 444 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 THAP2Q9H0W7 228 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 PARVAQ9NVD7 372 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 CUEDC1Q9NWM3 386 aaPredicted RBP9.44□□□□□ -0.9
SMC4-213ENST00000472282 RRN3Q9NYV6 651 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 SCINQ9Y6U3 715 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 PLXNA2O75051 1894 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 IGHV1OR15-9A0A0B4J2B8 117 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 ANKRD62A6NC57 917 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 SOWAHDA6NJG2 315 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 GFRA2O00451 464 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 GIPC1O14908 333 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 CCP110O43303 1012 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 ACSL4O60488 711 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 TSPAN3O60637 253 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 APOEP02649 317 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 FBXO45P0C2W1 286 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 PDGFRAP16234 1089 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 ITPKAP23677 461 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 IL12RB1P42701 662 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 PTPN9P43378 593 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 SGSHP51688 502 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 OGDHQ02218 1023 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 EIF4EBP2Q13542 120 aaPredicted RBP9.43□□□□□ -0.9
SMC4-213ENST00000472282 CCDC14Q49A88 953 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 RAB6CQ53S08 254 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 N4BP2L1Q5TBK1 243 aaPredicted RBP9.43□□□□□ -0.9
SMC4-213ENST00000472282 SH3PXD2AQ5TCZ1 1133 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 LPCAT2Q7L5N7 544 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 BNIPLQ7Z465 357 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 TRMT11Q7Z4G4 463 aaKnown RBP9.43□□□□□ -0.9
SMC4-213ENST00000472282 C11orf74Q86VG3 221 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 TMEM139Q8IV31 216 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 SLC41A1Q8IVJ1 513 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 UNC45BQ8IWX7 931 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 CPXM2Q8N436 756 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 SORCS1Q8WY21 1168 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 CTNNBL1Q8WYA6 563 aaPredicted RBP9.43□□□□□ -0.9
SMC4-213ENST00000472282 RNF34Q969K3 372 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 NT5C3BQ969T7 300 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 TRIM7Q9C029 511 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 RAB6CQ9H0N0 254 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 PIGVQ9NUD9 493 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 XPO7Q9UIA9 1087 aaKnown RBP9.43□□□□□ -0.9
SMC4-213ENST00000472282 CYP8B1Q9UNU6 501 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 ZNF510Q9Y2H8 683 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 SLC27A6Q9Y2P4 619 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 STON1Q9Y6Q2 735 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 SHROOM3Q8TF72 1996 aa9.43□□□□□ -0.9
SMC4-213ENST00000472282 NCOR2Q9Y618 2525 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 GOLGA6L7A0A1B0GV03 622 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 TMEM191CA6NGB0 347 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 KHNYNO15037 678 aaKnown RBP9.42□□□□□ -0.9
SMC4-213ENST00000472282 KCNK5O95279 499 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 LATS1O95835 1130 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 CYP1A2P05177 515 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 H2AFZP0C0S5 128 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 SLC2A3P11169 496 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 PRKCHP24723 683 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 PSMA2P25787 234 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 HOXD9P28356 352 aaPredicted RBP9.42□□□□□ -0.9
SMC4-213ENST00000472282 SLC6A4P31645 630 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 CCR1P32246 355 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 RDXP35241 583 aaKnown RBP9.42□□□□□ -0.9
SMC4-213ENST00000472282 CYLC1P35663 651 aaPredicted RBP9.42□□□□□ -0.9
SMC4-213ENST00000472282 CHKAP35790 457 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 CXCR3P49682 368 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 ZNF143P52747 638 aaPredicted RBP9.42□□□□□ -0.9
SMC4-213ENST00000472282 GSDMDP57764 484 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 ZNF252P-AS1Q0IIN9 211 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 ENPP2Q13822 863 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 FUT11Q495W5 492 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 PREPLQ4J6C6 727 aaPredicted RBP9.42□□□□□ -0.9
SMC4-213ENST00000472282 FAM133BQ5BKY9 247 aaKnown RBP9.42□□□□□ -0.9
SMC4-213ENST00000472282 TRIM61Q5EBN2 209 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 PEAR1Q5VY43 1037 aaPredicted RBP9.42□□□□□ -0.9
SMC4-213ENST00000472282 NADSYN1Q6IA69 706 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 RAD9BQ6WBX8 426 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 H2AFVQ71UI9 128 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 SND1Q7KZF4 910 aaKnown RBP eCLIP9.42□□□□□ -0.96e-9■■■■■ 32.8
SMC4-213ENST00000472282 STRADAQ7RTN6 431 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 FAM131BQ86XD5 332 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 TMTC1Q8IUR5 882 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 ATP6V0D2Q8N8Y2 350 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 WFDC5Q8TCV5 224 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 FAM172AQ8WUF8 416 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 MYEOVQ96EZ4 313 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 PGAP3Q96FM1 320 aaPredicted RBP9.42□□□□□ -0.9
SMC4-213ENST00000472282 SPACA7Q96KW9 195 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 MRGPRX1Q96LB2 322 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 BAG1Q99933 345 aaPredicted RBP9.42□□□□□ -0.9
SMC4-213ENST00000472282 CNPY3Q9BT09 278 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 NUP85Q9BW27 656 aa9.42□□□□□ -0.9
SMC4-213ENST00000472282 MKRN2Q9H000 416 aaKnown RBP9.42□□□□□ -0.9
SMC4-213ENST00000472282 MRPL47Q9HD33 250 aaKnown RBP9.42□□□□□ -0.9
SMC4-213ENST00000472282 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMC4-213ENST00000472282 THAP10Q9P2Z0 257 aaPredicted RBP9.42□□□□□ -0.9
SMC4-213ENST00000472282 PILRBQ9UKJ0 227 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms