RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PDHA1P08559 390 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 DGKGP49619 791 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 MILR1Q7Z6M3 343 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 AHI1Q8N157 1196 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 MSL3Q8N5Y2 521 aaKnown RBP8.72□□□□□ -1.01
CD47-204ENST00000471694 DAGLBQ8NCG7 672 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 TMC2Q8TDI7 906 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 FAM126AQ9BYI3 521 aaPredicted RBP8.72□□□□□ -1.01
CD47-204ENST00000471694 UNC93B1Q9H1C4 597 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 COPS7AQ9UBW8 275 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 AMACRQ9UHK6 382 aa8.72□□□□□ -1.01
CD47-204ENST00000471694 FAM220BPB1ANY3 271 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 FOXP2O15409 715 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 TIMM44O43615 452 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 SGTAO43765 313 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 LSM8O95777 96 aaKnown RBP8.71□□□□□ -1.01
CD47-204ENST00000471694 TPBGLP0DKB5 382 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 RFC2P35250 354 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 CLCN1P35523 988 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 CD86P42081 329 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 AVPR1BP47901 424 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 STOX1Q6ZVD7 989 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 ELMO3Q96BJ8 720 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 NRDE2Q9H7Z3 1164 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 ABHD14A-ACY1A0A1B0GW23 586 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 KERAO60938 352 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 SEC22BO75396 215 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 TNFP01375 233 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 PFKMP08237 780 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 CORO1AP31146 461 aaKnown RBP8.71□□□□□ -1.01
CD47-204ENST00000471694 NEK2P51955 445 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 ACLYP53396 1101 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 CASP9P55211 416 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 CYP4F8P98187 520 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 SGCBQ16585 318 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 SMU1Q2TAY7 513 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 C16orf46Q6P387 395 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 C2orf73Q8N5S3 287 aaPredicted RBP8.71□□□□□ -1.01
CD47-204ENST00000471694 LMX1AQ8TE12 382 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 BADQ92934 168 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 SCN3BQ9NY72 215 aa8.71□□□□□ -1.01
CD47-204ENST00000471694 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.71□□□□□ -1.02
CD47-204ENST00000471694 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.71□□□□□ -1.02
CD47-204ENST00000471694 F8VP50 259 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 BTN3A1O00481 513 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 CCNYL3P0C7X3 344 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 AMPD1P23109 780 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 NFIL3Q16649 462 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 AP5B1Q2VPB7 878 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 CFAP52Q8N1V2 620 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 ZFP28Q8NHY6 868 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 PIGKQ92643 395 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 IQGAP1P46940 1657 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 H0YC42 278 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 SYPP08247 313 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 JUPP14923 745 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 ITIH2P19823 946 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 MLLT3P42568 568 aaPredicted RBP8.71□□□□□ -1.02
CD47-204ENST00000471694 TUSC3Q13454 348 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 GRM2Q14416 872 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 SLC18A3Q16572 532 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 CHRDL2Q6WN34 429 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 ZPBP2Q6X784 338 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 TRPC4APQ8TEL6 797 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 DCBLD2Q96PD2 775 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 FRMD8P1Q9BZ68 369 aaPredicted RBP8.71□□□□□ -1.02
CD47-204ENST00000471694 ADAM21Q9UKJ8 722 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 ADAM28Q9UKQ2 775 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 PAIP2BQ9ULR5 123 aaKnown RBP8.71□□□□□ -1.02
CD47-204ENST00000471694 INVSQ9Y283 1065 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 CNTNAP1P78357 1384 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 NEMP2A6NFY4 417 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 M0R3G1 203 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 SMAPO00193 183 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 RBP1P09455 135 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 LPAL2Q16609 132 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 TRIM71Q2Q1W2 868 aaKnown RBP8.71□□□□□ -1.02
CD47-204ENST00000471694 KLHDC7AQ5VTJ3 777 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 ST13P4Q8IZP2 240 aaPredicted RBP8.71□□□□□ -1.02
CD47-204ENST00000471694 OR2W6PQ8NHA6 318 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 TPD52L3Q96J77 140 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 SAMD11Q96NU1 681 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 GPR88Q9GZN0 384 aa8.71□□□□□ -1.02
CD47-204ENST00000471694 LRRC7Q96NW7 1537 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 B2RBV5 119 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 ARHGEF9O43307 516 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 STBD1O95210 358 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 OR4Q2P0C623 313 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 SLC6A3Q01959 620 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 STK4Q13043 487 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 STX5Q13190 355 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 CAMK1Q14012 370 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 TMEM154Q6P9G4 183 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 C16orf87Q6PH81 154 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 MFSD7Q6UXD7 560 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 PAGE2Q7Z2X7 111 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 IL22RA1Q8N6P7 574 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 SPPL2BQ8TCT7 592 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 SLC4A9Q96Q91 983 aa8.7□□□□□ -1.02
CD47-204ENST00000471694 CDADC1Q9BWV3 514 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms