RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 RPL10LQ96L21 214 aaKnown RBP12.71□□□□□ -0.38
LINC00888-202ENST00000471496 SNRNP25Q9BV90 132 aaKnown RBP12.71□□□□□ -0.38
LINC00888-202ENST00000471496 NUP85Q9BW27 656 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 PRSS16Q9NQE7 514 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 GPATCH2LQ9NWQ4 482 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 SMG5Q9UPR3 1016 aaKnown RBP12.71□□□□□ -0.38
LINC00888-202ENST00000471496 INVSQ9Y283 1065 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 FAM186AA6NE01 2351 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 DMXL1Q9Y485 3027 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 EP300Q09472 2414 aaPredicted RBP12.7□□□□□ -0.38
LINC00888-202ENST00000471496 TTC34A8MYJ7 566 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 AKR1B10O60218 316 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 MOCS3O95396 460 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 RHOCP08134 193 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 SRPRAP08240 638 aaKnown RBP12.7□□□□□ -0.38
LINC00888-202ENST00000471496 RHOQP17081 205 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 BCKDHBP21953 392 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 IL1R2P27930 398 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 OR1E1P30953 314 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 PCK1P35558 622 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 SIM2Q14190 667 aaPredicted RBP12.7□□□□□ -0.38
LINC00888-202ENST00000471496 ACAP1Q15027 740 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 HNRNPA1L2Q32P51 320 aaKnown RBP12.7□□□□□ -0.38
LINC00888-202ENST00000471496 EFHC2Q5JST6 749 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 KBTBD6Q86V97 674 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 CPNE8Q86YQ8 564 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 PARP9Q8IXQ6 854 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 TBC1D31Q96DN5 1066 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 ZC3H10Q96K80 434 aaKnown RBP12.7□□□□□ -0.38
LINC00888-202ENST00000471496 CCDC42Q96M95 316 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 DUSP15Q9H1R2 295 aaPredicted RBP12.7□□□□□ -0.38
LINC00888-202ENST00000471496 TMEM248Q9NWD8 314 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 PCSK1NQ9UHG2 260 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 MBD1Q9UIS9 605 aaPredicted RBP12.7□□□□□ -0.38
LINC00888-202ENST00000471496 ANAPC7Q9UJX3 599 aa12.7□□□□□ -0.38
LINC00888-202ENST00000471496 NUMA1Q14980 2115 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 ILVBLA1L0T0 632 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 SNAP91O60641 907 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 ZMPSTE24O75844 475 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 RNF8O76064 485 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 H2AFZP0C0S5 128 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 TMEM253P0C7T8 217 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 GLDCP23378 1020 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 PIGHQ14442 188 aaPredicted RBP12.69□□□□□ -0.38
LINC00888-202ENST00000471496 STARD3Q14849 445 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 LPAL2Q16609 132 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 PLK5Q496M5 336 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 USP39Q53GS9 565 aaKnown RBP12.69□□□□□ -0.38
LINC00888-202ENST00000471496 C6orf118Q5T5N4 469 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 ERMARDQ5T6L9 678 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 C9orf64Q5T6V5 341 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 TXNRD3NBQ6F5E7 133 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 RWDD4Q6NW29 188 aaKnown RBP12.69□□□□□ -0.38
LINC00888-202ENST00000471496 ZNF783Q6ZMS7 281 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 H2AFVQ71UI9 128 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 TMPRSS6Q8IU80 811 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 CYP4X1Q8N118 509 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 OR7D4Q8NG98 312 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 OR2T3Q8NH03 318 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 FRS2Q8WU20 508 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 DEF6Q9H4E7 631 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 RETREG1Q9H6L5 497 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 NOL6Q9H6R4 1146 aaKnown RBP12.69□□□□□ -0.38
LINC00888-202ENST00000471496 BCCIPQ9P287 314 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC00888-202ENST00000471496 VPS51Q9UID3 782 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 VPS28Q9UK41 221 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 USP18Q9UMW8 372 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 AP4E1Q9UPM8 1137 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 GVINP1Q7Z2Y8 2422 aa12.69□□□□□ -0.38
LINC00888-202ENST00000471496 WASH4PA8MWX3 477 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 SYNCRIPO60506 623 aaKnown RBP12.68□□□□□ -0.38
LINC00888-202ENST00000471496 SIN3BO75182 1162 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 LCA5LO95447 670 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 CD160O95971 181 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 MT-CO1P00395 513 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 VAV1P15498 845 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 ACVRL1P37023 503 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 MAPKAPK2P49137 400 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 SLC25A11Q02978 314 aaKnown RBP12.68□□□□□ -0.38
LINC00888-202ENST00000471496 GNA12Q03113 381 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 SULT2A1Q06520 285 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 PRR23BQ6ZRT6 265 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 PSTKQ8IV42 348 aaKnown RBP12.68□□□□□ -0.38
LINC00888-202ENST00000471496 PGBD3Q8N328 593 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 RTL3Q8N8U3 475 aaKnown RBP12.68□□□□□ -0.38
LINC00888-202ENST00000471496 DCAF4L2Q8NA75 395 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 ZNF564Q8TBZ8 553 aaPredicted RBP12.68□□□□□ -0.38
LINC00888-202ENST00000471496 PTPRN2Q92932 1015 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 PANX2Q96RD6 677 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 KCTD15Q96SI1 283 aaPredicted RBP12.68□□□□□ -0.38
LINC00888-202ENST00000471496 ANP32EQ9BTT0 268 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 ACE2Q9BYF1 805 aaPredicted RBP12.68□□□□□ -0.38
LINC00888-202ENST00000471496 MUC3BQ9H195 1237 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 PRDM16Q9HAZ2 1276 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 OSGEPQ9NPF4 335 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 TOR4AQ9NXH8 423 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 USP36Q9P275 1121 aaKnown RBP12.68□□□□□ -0.38
LINC00888-202ENST00000471496 UVRAGQ9P2Y5 699 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 IP6K2Q9UHH9 426 aa12.68□□□□□ -0.38
LINC00888-202ENST00000471496 DNAI1Q9UI46 699 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms